Click here to switch to the map view.

The map label for this gene is 94311618

Identifier: 94311618

GI number: 94311618

Start: 2918911

End: 2919387

Strand: Direct

Name: 94311618

Synonym: Rmet_2686

Alternate gene names: NA

Gene position: 2918911-2919387 (Clockwise)

Preceding gene: 94311617

Following gene: 94311619

Centisome position: 74.31

GC content: 66.67

Gene sequence:

>477_bases
ATGAACCTCGCTCAACTCGCTCACCCTAGAAGCATCAGTGGCCGCCAAACCGGCTTCAGTCTTGCCGAACTACTGGTGAC
CCTGCTGATCGCCGCAATCCTGTCGATGCTGGCGATGCCCGCATGGCGGCATCATCTGGAACGCGCGTGGCGCGTACAGG
CACGGGCCGAGCTGGTTTCCGCGATGCTCGCACTCGAGCGGCACGCCCTGCTCACCACCTCGTTCGCCAGCACACCGGGC
GCGGCGACACCAGCCGGCCAGTGGCCGCGTCCCGTACCGCCCCCACCAGCCCGCACGCGCCACTGGCTGACTGCCACAAG
CTGTGCCGGACTCGATCTGTCGCGTTGTGTGGAGATACGCGCCACGCCAGTGCATGTGGACAAAGCGTGTGGCACGCTGG
TCCTGCGCAGCAATGGCGAGTGGCTCTCCATGCCCACGGCGGACGCCGCCGCCATTCCGTTGCCTTGGGAGTGCTGA

Upstream 100 bases:

>100_bases
TCTGGCAGGTCGACGGCAACACCGCGCATCTCGCGCAGAACACGCACTATCGGCGCCGGCGCGGACGCCTTGGCTGGCGC
GAACTGATCCGGACCGAGCC

Downstream 100 bases:

>100_bases
CATGCGAACCACAGGCCACGCGTCCCGAAACGCCAAACGCGGCGCCACCTTGCCCGAACTGCTGATCTCGTTGGCCATCA
GCGCGATCCTGGCCATCGCC

Product: putative type IV pilus assembly protein (PilE-like)

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilE; Type-4 Frimbrial Pilin-Related Signal Peptide Protein; Pilus Assembly Protein PilE; Type IV Pilus Assembly Protein Pile

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MNLAQLAHPRSISGRQTGFSLAELLVTLLIAAILSMLAMPAWRHHLERAWRVQARAELVSAMLALERHALLTTSFASTPG
AATPAGQWPRPVPPPPARTRHWLTATSCAGLDLSRCVEIRATPVHVDKACGTLVLRSNGEWLSMPTADAAAIPLPWEC

Sequences:

>Translated_158_residues
MNLAQLAHPRSISGRQTGFSLAELLVTLLIAAILSMLAMPAWRHHLERAWRVQARAELVSAMLALERHALLTTSFASTPG
AATPAGQWPRPVPPPPARTRHWLTATSCAGLDLSRCVEIRATPVHVDKACGTLVLRSNGEWLSMPTADAAAIPLPWEC
>Mature_158_residues
MNLAQLAHPRSISGRQTGFSLAELLVTLLIAAILSMLAMPAWRHHLERAWRVQARAELVSAMLALERHALLTTSFASTPG
AATPAGQWPRPVPPPPARTRHWLTATSCAGLDLSRCVEIRATPVHVDKACGTLVLRSNGEWLSMPTADAAAIPLPWEC

Specific function: Unknown

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17096; Mature: 17096

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAQLAHPRSISGRQTGFSLAELLVTLLIAAILSMLAMPAWRHHLERAWRVQARAELVS
CCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AMLALERHALLTTSFASTPGAATPAGQWPRPVPPPPARTRHWLTATSCAGLDLSRCVEIR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHC
ATPVHVDKACGTLVLRSNGEWLSMPTADAAAIPLPWEC
CCCEEECCCCCEEEECCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNLAQLAHPRSISGRQTGFSLAELLVTLLIAAILSMLAMPAWRHHLERAWRVQARAELVS
CCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AMLALERHALLTTSFASTPGAATPAGQWPRPVPPPPARTRHWLTATSCAGLDLSRCVEIR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHC
ATPVHVDKACGTLVLRSNGEWLSMPTADAAAIPLPWEC
CCCEEECCCCCEEEECCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA