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The map label for this gene is nrdR [H]

Identifier: 94311613

GI number: 94311613

Start: 2914555

End: 2915022

Strand: Direct

Name: nrdR [H]

Synonym: Rmet_2681

Alternate gene names: 94311613

Gene position: 2914555-2915022 (Clockwise)

Preceding gene: 94311612

Following gene: 94311614

Centisome position: 74.2

GC content: 59.19

Gene sequence:

>468_bases
ATGAAATGCCCCTTCTGCGGTCATTCCAGCACTCAGGTTCTTGACAGCCGCGTCTCGGAAGATGGCGATACCGTGCGCCG
CCGACGCCGCTGTGAAGCCTGCGACCGCCGCTTCACCACCTACGAGCGGATCGAGCTGTTCTTTCCCGCCATCGTCAAGA
AAAATGGCTCGCGCGTGGACTACGCGCGTGCCAAGCTCAAGGATTCGATGCGGCTGGCACTGCGCAAGCGGCCAGTTTCC
GCCGAGGCCATCGACGAAGCGATCACTCGCATCGAAGAAAAACTGCTGGCTCTGGGCGAGAAGGAGATCCCGAGCAGCCA
GGTCGGCGAACTGGTCATGCGTGAGCTTCGCAAGCTCGACAAGATCGCCTATATCCGCTTTGCCTCCGTGTATCGCAGCT
TCGAGGACGTTTCCGAATTCCGGGAAATGCTCGACGAATTCTCGTCATCTACCCCACGAAAGGGGTAA

Upstream 100 bases:

>100_bases
CCACCTCTGAGGTGGCAGCGCCGTTTCAACAACCAGCACGACCGCAACAGAAATCGAAGATGCAAAATGCGGTCAGGCTC
TTACTTTCAGGTGGTCAGGC

Downstream 100 bases:

>100_bases
TAAGGACCGCAAAAAAGCTGGCTGATCACCACTTGCCGCTCTTGGCTAGAGACAGGCAAGCGAGCGCGCGTGCAAGTCCG
CCTCATGGCGCGTGCGCAAA

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKCPFCGHSSTQVLDSRVSEDGDTVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVDYARAKLKDSMRLALRKRPVS
AEAIDEAITRIEEKLLALGEKEIPSSQVGELVMRELRKLDKIAYIRFASVYRSFEDVSEFREMLDEFSSSTPRKG

Sequences:

>Translated_155_residues
MKCPFCGHSSTQVLDSRVSEDGDTVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVDYARAKLKDSMRLALRKRPVS
AEAIDEAITRIEEKLLALGEKEIPSSQVGELVMRELRKLDKIAYIRFASVYRSFEDVSEFREMLDEFSSSTPRKG
>Mature_155_residues
MKCPFCGHSSTQVLDSRVSEDGDTVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVDYARAKLKDSMRLALRKRPVS
AEAIDEAITRIEEKLLALGEKEIPSSQVGELVMRELRKLDKIAYIRFASVYRSFEDVSEFREMLDEFSSSTPRKG

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=142, Percent_Identity=53.5211267605634, Blast_Score=158, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17977; Mature: 17977

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPFCGHSSTQVLDSRVSEDGDTVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVD
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YARAKLKDSMRLALRKRPVSAEAIDEAITRIEEKLLALGEKEIPSSQVGELVMRELRKLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KIAYIRFASVYRSFEDVSEFREMLDEFSSSTPRKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKCPFCGHSSTQVLDSRVSEDGDTVRRRRRCEACDRRFTTYERIELFFPAIVKKNGSRVD
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YARAKLKDSMRLALRKRPVSAEAIDEAITRIEEKLLALGEKEIPSSQVGELVMRELRKLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KIAYIRFASVYRSFEDVSEFREMLDEFSSSTPRKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA