| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yhjG [H]
Identifier: 94311576
GI number: 94311576
Start: 2875825
End: 2878032
Strand: Direct
Name: yhjG [H]
Synonym: Rmet_2640
Alternate gene names: 94311576
Gene position: 2875825-2878032 (Clockwise)
Preceding gene: 94311574
Following gene: 94311577
Centisome position: 73.21
GC content: 65.44
Gene sequence:
>2208_bases ATGCCCGCCTCGCACCGCCGCCGCAAGATTGCTCTCTGGAGCCTGTTCACGCCACTGGCGCTGATCGCGCTGGTGGTCGT CGTCGTCCTGACCTTCGACTGGAACCGCATCAAGCCGTGGCTCAACGACAAGGTCACACAGGCCATCGGCCGGCCATTCG CCATCAACGGTGACCTGACGGTGACCTGGAGACGTGCCGAGGGCGAGGCCGGCTGGCGCGCGCTGGTGCCGTGGCCCCGC CTGTCGGCCAAGGACATCACGGTCGGCAACCCGGACTGGGCCAAGCAGCCGAGCCTCGCCACCATCCGCGAGCTGATCTT TATCCTGCGGCCAGCCCCGCTGCTGACGCACGAGATCAGCGTGCCTACGATCGTGGTGGACAGCCCCGCGGTCTGGCTCG AACGCCTGGCCGACCGCCGTAACAACTGGACATTCGATACCGGACCGGAAACCGGCGAGTCGCCGTGGCATCTCGATGTT GGCGAAATCGTGCTGGAACGCGGCAACCTGTCCCTGAACGATGGCGCGGAGAAGATCGAGTTGCAGGCCACACTCGACAC GATCGGCGACCAGCCACTCTACGATCAGGAACGCGACGGCGCGCTCGCCCCGTCCGCTGACGCCTCGGCGGCTTCCGCGC CCGCGGGCGCGTCAAACAAGACGGAAAGCAAACCCGAGAGCCGTTATGGCATCCGCTGGAAGGTCGTCGGCCATTACAAC CAGGCCACGATCAATGCGACGGGCAAGGCCGGCACGGCGCTGAGCCTGCGCGACACCCGCAAGCCTTTCCCGCTCCAGGC CGACGTACGCGTCGGCGGCACGCGGGCCCGAATCGAGGGAACGCTGACCAATCCGGCGGAACTGGGTGCGCTGGACGTGA GTCTGGTGCTGTCCGGCGACAACATGGCGCGGCTCTACGCGCTGACCGGCGTGGTGCTGCCATCCACGCCGCCGTACGAA ACACGCGGCCGGCTGGTGGCCACACTCAAGAAAGGCGCATCGTCCTATACATACCGAAACTTCACGGGCAAGGTTGGCAG CAGTGACCTCGGTGGCACGCTGACGTTCGCGCAGCGCGCGCCACGACCGTTGCTGTCCGGTGAGCTGGTGTCGAAACAGC TGCTATTCACCGATCTCGCGCCGATCATCGGCGCCGAGGCCAAGCCCGGCCAGGCCGCCGCGGAAAGCACGGTCAAGCAG CCCGCAAACAAGGTACTGCCCGTGGCACCCTTTCATACCGAGCGCTGGGATGCCATCGATGCCGATGTGACATTCACGGG AGAGCGCATCGTTCGCGACGAAACGCTGCCGATCACGAAACTGACCACGCACGTCAAGCTGACCGATGGCGTGTTGCGGC TCGATCCCCTCAATTTCGGCCTGGCCGGCGGCAACCTCGTCTCGACGATCCAGCTCGATGGCAAGCGCGAGCCGATGGCT GCCATGGTCGACATGCACGCACGCCATCTGCAGATCCGGCAGCTCTTCCCGAAGATCGAGTCGATGCACGCGAGCGTTGG CGAGGTCAATGGCGGTGCCAGGCTGACCGCCACCGGCAACTCGGTCGCGGCGCTGCTCGGCTCGGCGAACGGCGAAGCCC GGTTGCTGGTCGAGAATGGCACGGTCAGCAAGTTCATCCTGGAGGCAATCGGCCTGAACGTCGGCAGTGTGGTGATTTCG AAGCTCTTCGGCGACAAGCCGGTGCAGATCAACTGCGGCGTCAGCGCGTTCGGCATCACCAATGGCGTGGCCCAAGCGCA GACATTTGTGCTCGACACGCAGGATGCCGTGATCACGACCGAAGGCGCGATCGACTTCAAGGACGAGGAACTGGCCCTGA CGATTCATCCCGATTCCAAGGGATTGCGCATCCTCTCGCTGCGCTCGCCGCTCTACGTCGGCGGAACATTCAAGAAGCCG TCCGTCAGTCCGAACTACGCCATCCTGGCGCTGCGCGCCGGCAGCGCGCTGGCGCTGGCATTTACGGCGCCTGTCGCACT GGTGGTCCCCCTGCTCGACATCTCGCCGGCAGAGGACAGCCAGTGCGGCAAGCTGCTGGCGAACCTGAAAAAGCGGCCTG TCATTGCCACGCCGCCGGGCAAGCCCGGTCCAAAGAACCGGCAGCCCGCATCCACCCCATCTGTCCCCGCTGCACCGCAC AATCTGTCGCGTCCTACCAACGATGCGCAGCTCTTCCAGGGGGGCTGA
Upstream 100 bases:
>100_bases GAAAGTCAGTCAAAGGCGGACAAACGCATTGGCATTGCCTCCCTACAATAGGCATAGTGGTTGATCCGCCGCATGGCTGA CACCAGGAGATAACGTTCCC
Downstream 100 bases:
>100_bases AGGCCGGCCATGGGTTACGCATGGCTTCCACGCAACAGATCGCTGAAAGAATCTGTTGCGGATTTGCACTTCCCCCCCTT CACCAACGTTGTGCATGACC
Product: putative outer membrane biogenesis protein (yhjG-like)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MPASHRRRKIALWSLFTPLALIALVVVVVLTFDWNRIKPWLNDKVTQAIGRPFAINGDLTVTWRRAEGEAGWRALVPWPR LSAKDITVGNPDWAKQPSLATIRELIFILRPAPLLTHEISVPTIVVDSPAVWLERLADRRNNWTFDTGPETGESPWHLDV GEIVLERGNLSLNDGAEKIELQATLDTIGDQPLYDQERDGALAPSADASAASAPAGASNKTESKPESRYGIRWKVVGHYN QATINATGKAGTALSLRDTRKPFPLQADVRVGGTRARIEGTLTNPAELGALDVSLVLSGDNMARLYALTGVVLPSTPPYE TRGRLVATLKKGASSYTYRNFTGKVGSSDLGGTLTFAQRAPRPLLSGELVSKQLLFTDLAPIIGAEAKPGQAAAESTVKQ PANKVLPVAPFHTERWDAIDADVTFTGERIVRDETLPITKLTTHVKLTDGVLRLDPLNFGLAGGNLVSTIQLDGKREPMA AMVDMHARHLQIRQLFPKIESMHASVGEVNGGARLTATGNSVAALLGSANGEARLLVENGTVSKFILEAIGLNVGSVVIS KLFGDKPVQINCGVSAFGITNGVAQAQTFVLDTQDAVITTEGAIDFKDEELALTIHPDSKGLRILSLRSPLYVGGTFKKP SVSPNYAILALRAGSALALAFTAPVALVVPLLDISPAEDSQCGKLLANLKKRPVIATPPGKPGPKNRQPASTPSVPAAPH NLSRPTNDAQLFQGG
Sequences:
>Translated_735_residues MPASHRRRKIALWSLFTPLALIALVVVVVLTFDWNRIKPWLNDKVTQAIGRPFAINGDLTVTWRRAEGEAGWRALVPWPR LSAKDITVGNPDWAKQPSLATIRELIFILRPAPLLTHEISVPTIVVDSPAVWLERLADRRNNWTFDTGPETGESPWHLDV GEIVLERGNLSLNDGAEKIELQATLDTIGDQPLYDQERDGALAPSADASAASAPAGASNKTESKPESRYGIRWKVVGHYN QATINATGKAGTALSLRDTRKPFPLQADVRVGGTRARIEGTLTNPAELGALDVSLVLSGDNMARLYALTGVVLPSTPPYE TRGRLVATLKKGASSYTYRNFTGKVGSSDLGGTLTFAQRAPRPLLSGELVSKQLLFTDLAPIIGAEAKPGQAAAESTVKQ PANKVLPVAPFHTERWDAIDADVTFTGERIVRDETLPITKLTTHVKLTDGVLRLDPLNFGLAGGNLVSTIQLDGKREPMA AMVDMHARHLQIRQLFPKIESMHASVGEVNGGARLTATGNSVAALLGSANGEARLLVENGTVSKFILEAIGLNVGSVVIS KLFGDKPVQINCGVSAFGITNGVAQAQTFVLDTQDAVITTEGAIDFKDEELALTIHPDSKGLRILSLRSPLYVGGTFKKP SVSPNYAILALRAGSALALAFTAPVALVVPLLDISPAEDSQCGKLLANLKKRPVIATPPGKPGPKNRQPASTPSVPAAPH NLSRPTNDAQLFQGG >Mature_734_residues PASHRRRKIALWSLFTPLALIALVVVVVLTFDWNRIKPWLNDKVTQAIGRPFAINGDLTVTWRRAEGEAGWRALVPWPRL SAKDITVGNPDWAKQPSLATIRELIFILRPAPLLTHEISVPTIVVDSPAVWLERLADRRNNWTFDTGPETGESPWHLDVG EIVLERGNLSLNDGAEKIELQATLDTIGDQPLYDQERDGALAPSADASAASAPAGASNKTESKPESRYGIRWKVVGHYNQ ATINATGKAGTALSLRDTRKPFPLQADVRVGGTRARIEGTLTNPAELGALDVSLVLSGDNMARLYALTGVVLPSTPPYET RGRLVATLKKGASSYTYRNFTGKVGSSDLGGTLTFAQRAPRPLLSGELVSKQLLFTDLAPIIGAEAKPGQAAAESTVKQP ANKVLPVAPFHTERWDAIDADVTFTGERIVRDETLPITKLTTHVKLTDGVLRLDPLNFGLAGGNLVSTIQLDGKREPMAA MVDMHARHLQIRQLFPKIESMHASVGEVNGGARLTATGNSVAALLGSANGEARLLVENGTVSKFILEAIGLNVGSVVISK LFGDKPVQINCGVSAFGITNGVAQAQTFVLDTQDAVITTEGAIDFKDEELALTIHPDSKGLRILSLRSPLYVGGTFKKPS VSPNYAILALRAGSALALAFTAPVALVVPLLDISPAEDSQCGKLLANLKKRPVIATPPGKPGPKNRQPASTPSVPAAPHN LSRPTNDAQLFQGG
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=689, Percent_Identity=40.2031930333817, Blast_Score=531, Evalue=1e-152,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 78571; Mature: 78440
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASHRRRKIALWSLFTPLALIALVVVVVLTFDWNRIKPWLNDKVTQAIGRPFAINGDLT CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCEEECCCEE VTWRRAEGEAGWRALVPWPRLSAKDITVGNPDWAKQPSLATIRELIFILRPAPLLTHEIS EEEEECCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHEEECC VPTIVVDSPAVWLERLADRRNNWTFDTGPETGESPWHLDVGEIVLERGNLSLNDGAEKIE CCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHEECCCEEECCCCCEEE LQATLDTIGDQPLYDQERDGALAPSADASAASAPAGASNKTESKPESRYGIRWKVVGHYN EEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC QATINATGKAGTALSLRDTRKPFPLQADVRVGGTRARIEGTLTNPAELGALDVSLVLSGD EEEEEECCCCCCEEEECCCCCCCCEEECEEECCEEEEEEEEECCCHHCCEEEEEEEECCC NMARLYALTGVVLPSTPPYETRGRLVATLKKGASSYTYRNFTGKVGSSDLGGTLTFAQRA CCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEHHHC PRPLLSGELVSKQLLFTDLAPIIGAEAKPGQAAAESTVKQPANKVLPVAPFHTERWDAID CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ADVTFTGERIVRDETLPITKLTTHVKLTDGVLRLDPLNFGLAGGNLVSTIQLDGKREPMA CCEEECCCEEECCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCHH AMVDMHARHLQIRQLFPKIESMHASVGEVNGGARLTATGNSVAALLGSANGEARLLVENG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECC TVSKFILEAIGLNVGSVVISKLFGDKPVQINCGVSAFGITNGVAQAQTFVLDTQDAVITT CHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCEEEECCCCCHHHCEEEEEECCCEEEEE EGAIDFKDEELALTIHPDSKGLRILSLRSPLYVGGTFKKPSVSPNYAILALRAGSALALA CCCEEECCCEEEEEECCCCCCEEEEEECCCEEECCCCCCCCCCCCEEEEEEECCCEEEEE FTAPVALVVPLLDISPAEDSQCGKLLANLKKRPVIATPPGKPGPKNRQPASTPSVPAAPH HHCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCC NLSRPTNDAQLFQGG CCCCCCCCCCEECCC >Mature Secondary Structure PASHRRRKIALWSLFTPLALIALVVVVVLTFDWNRIKPWLNDKVTQAIGRPFAINGDLT CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCEEECCCEE VTWRRAEGEAGWRALVPWPRLSAKDITVGNPDWAKQPSLATIRELIFILRPAPLLTHEIS EEEEECCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHEEECC VPTIVVDSPAVWLERLADRRNNWTFDTGPETGESPWHLDVGEIVLERGNLSLNDGAEKIE CCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHEECCCEEECCCCCEEE LQATLDTIGDQPLYDQERDGALAPSADASAASAPAGASNKTESKPESRYGIRWKVVGHYN EEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC QATINATGKAGTALSLRDTRKPFPLQADVRVGGTRARIEGTLTNPAELGALDVSLVLSGD EEEEEECCCCCCEEEECCCCCCCCEEECEEECCEEEEEEEEECCCHHCCEEEEEEEECCC NMARLYALTGVVLPSTPPYETRGRLVATLKKGASSYTYRNFTGKVGSSDLGGTLTFAQRA CCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEHHHC PRPLLSGELVSKQLLFTDLAPIIGAEAKPGQAAAESTVKQPANKVLPVAPFHTERWDAID CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ADVTFTGERIVRDETLPITKLTTHVKLTDGVLRLDPLNFGLAGGNLVSTIQLDGKREPMA CCEEECCCEEECCCCCCEEEEEEEEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCHH AMVDMHARHLQIRQLFPKIESMHASVGEVNGGARLTATGNSVAALLGSANGEARLLVENG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECC TVSKFILEAIGLNVGSVVISKLFGDKPVQINCGVSAFGITNGVAQAQTFVLDTQDAVITT CHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCEEEECCCCCHHHCEEEEEECCCEEEEE EGAIDFKDEELALTIHPDSKGLRILSLRSPLYVGGTFKKPSVSPNYAILALRAGSALALA CCCEEECCCEEEEEECCCCCCEEEEEECCCEEECCCCCCCCCCCCEEEEEEECCCEEEEE FTAPVALVVPLLDISPAEDSQCGKLLANLKKRPVIATPPGKPGPKNRQPASTPSVPAAPH HHCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCC NLSRPTNDAQLFQGG CCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]