| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311577
Identifier: 94311577
GI number: 94311577
Start: 2878342
End: 2879532
Strand: Direct
Name: 94311577
Synonym: Rmet_2641
Alternate gene names: NA
Gene position: 2878342-2879532 (Clockwise)
Preceding gene: 94311576
Following gene: 94311578
Centisome position: 73.28
GC content: 65.83
Gene sequence:
>1191_bases ATGACGTTGCCCCACGCCGCCGTCCCCCCGATCAGTTGGCTGATCGCGCTGACGGTGTGCAACCATTTGGCGTTCAACGC CAGTCGCGTCGTCGTTTCCCTCTTTGCCATCTCGCTGAAGGCGTCCACCGTGACGCTGGGCATCCTCATGTCGCTCTACG CGCTATTGCCGATGTTCCTGGCAATTCGCGCCGGCAAGCGCATTGACGAGATCGGGCCACGCCTGCCGATGACGGCGGGC TCGCTGATGGTGGTGGCCGGCACGCTGCTGCCAGCGGTCTGGCATGACATCGCCTCGCTGTACGGTGCCTGCGCGCTGAT CGGCGTGGGCTTCATGCTCGTGCAGGTGGCCATGCAACTGCTAATCGGTCAGGTATCGACCAACGAAACCCGCCTGCGCA ACTACACGCTACACGCACTGGGCCTGTCCATCTCGGGCACGCTGGGTCCCGTGGCGATGGGCTATATGATCGAGCACGCC GGATACCGTGCGGCATTCTGCGTGCTGGTGGCCATCGCGCTGGTCGGCCAGGCTGGCCTGCAGTACGTGCGTCCGCGCCT GCCGGCGCAAGGCGGCAACGCAGGCAGGATCGCCATCGAGGACGGCTCGCGCCGGTCGACGCTGGATCTGCTGCAGCACC CCGAGTTGCGTGCGGTGTTCATCGCCAGCGCCGTGCTTTCGGCCGCGTGGGATCTCCACGCGTTCCTGATTCCGATCCAG GGCACGCATATCGGCCTGTCTCCGTCGTCGATCGGCTGGGTACTCGGTGCGTTCTCGATCGCCACGCTGGCGATCCGCGT GGCCATGCCGATGGTGTCGCGCCACTTTTCCGAATGGCGGATCATCCGCCTGGCGCTGACCGTGGGCGCGATGGCATATC TGGTCTACCCGTTCGTGTCGCACTTCTGGCTCATGTGCAGCCTGGCATTCGTGCTCGGCCTCGCGCTGGGCAGCGCCCAG CCGAACGTCATGAACATCCTGCACACGGTGTCGCCGTCGGGCCGCGCCGGCGAGGCGCTTGGCCTGCGTTCGGCGGTACT GAACACGAGCCAGGTGGTGTGGCCGCTGACCTTTGGCGTGGTCGGCACGGCGCTTGGCATGTTGCCGATCTTCCTGTCGA TGGCCGGCGCGATGGGCATGGCGGGTTACTACTCGCGCAAACAGTCGCGCAAGATCGCCCTGCCCGACTAA
Upstream 100 bases:
>100_bases GCGGCCTCGCGCCGCACTGGTTTTTCTTTCGCGCGTCTTATCGCCTGGGCCCCTGAATCGTTGCCGGCGGCGCGAACCAC CCCATTGCCACCGCGCCCCC
Downstream 100 bases:
>100_bases GCACCCTCGGCGCCCCGAGGTGCCCTAAGCGCGTTGCGGCAACGCAAATGCAGCGTGCAGCGCATTCGCTATACTCGAAG TACGCATATCCGCGCGATTC
Product: putative major facilitator superfamily transporter
Products: NA
Alternate protein names: Inner Membrane Efflux Protein; Integral Membrane Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Transmembrane Efflux Protein; MFS Transporter; Multidrug Resistance Protein; Facilitator Superfamily Multidrug Resistance Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTLPHAAVPPISWLIALTVCNHLAFNASRVVVSLFAISLKASTVTLGILMSLYALLPMFLAIRAGKRIDEIGPRLPMTAG SLMVVAGTLLPAVWHDIASLYGACALIGVGFMLVQVAMQLLIGQVSTNETRLRNYTLHALGLSISGTLGPVAMGYMIEHA GYRAAFCVLVAIALVGQAGLQYVRPRLPAQGGNAGRIAIEDGSRRSTLDLLQHPELRAVFIASAVLSAAWDLHAFLIPIQ GTHIGLSPSSIGWVLGAFSIATLAIRVAMPMVSRHFSEWRIIRLALTVGAMAYLVYPFVSHFWLMCSLAFVLGLALGSAQ PNVMNILHTVSPSGRAGEALGLRSAVLNTSQVVWPLTFGVVGTALGMLPIFLSMAGAMGMAGYYSRKQSRKIALPD
Sequences:
>Translated_396_residues MTLPHAAVPPISWLIALTVCNHLAFNASRVVVSLFAISLKASTVTLGILMSLYALLPMFLAIRAGKRIDEIGPRLPMTAG SLMVVAGTLLPAVWHDIASLYGACALIGVGFMLVQVAMQLLIGQVSTNETRLRNYTLHALGLSISGTLGPVAMGYMIEHA GYRAAFCVLVAIALVGQAGLQYVRPRLPAQGGNAGRIAIEDGSRRSTLDLLQHPELRAVFIASAVLSAAWDLHAFLIPIQ GTHIGLSPSSIGWVLGAFSIATLAIRVAMPMVSRHFSEWRIIRLALTVGAMAYLVYPFVSHFWLMCSLAFVLGLALGSAQ PNVMNILHTVSPSGRAGEALGLRSAVLNTSQVVWPLTFGVVGTALGMLPIFLSMAGAMGMAGYYSRKQSRKIALPD >Mature_395_residues TLPHAAVPPISWLIALTVCNHLAFNASRVVVSLFAISLKASTVTLGILMSLYALLPMFLAIRAGKRIDEIGPRLPMTAGS LMVVAGTLLPAVWHDIASLYGACALIGVGFMLVQVAMQLLIGQVSTNETRLRNYTLHALGLSISGTLGPVAMGYMIEHAG YRAAFCVLVAIALVGQAGLQYVRPRLPAQGGNAGRIAIEDGSRRSTLDLLQHPELRAVFIASAVLSAAWDLHAFLIPIQG THIGLSPSSIGWVLGAFSIATLAIRVAMPMVSRHFSEWRIIRLALTVGAMAYLVYPFVSHFWLMCSLAFVLGLALGSAQP NVMNILHTVSPSGRAGEALGLRSAVLNTSQVVWPLTFGVVGTALGMLPIFLSMAGAMGMAGYYSRKQSRKIALPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42094; Mature: 41963
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPHAAVPPISWLIALTVCNHLAFNASRVVVSLFAISLKASTVTLGILMSLYALLPMFL CCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRAGKRIDEIGPRLPMTAGSLMVVAGTLLPAVWHDIASLYGACALIGVGFMLVQVAMQL HHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGQVSTNETRLRNYTLHALGLSISGTLGPVAMGYMIEHAGYRAAFCVLVAIALVGQAGL HHHCCCCCCHHHHHEEEEEECEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QYVRPRLPAQGGNAGRIAIEDGSRRSTLDLLQHPELRAVFIASAVLSAAWDLHAFLIPIQ HHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEC GTHIGLSPSSIGWVLGAFSIATLAIRVAMPMVSRHFSEWRIIRLALTVGAMAYLVYPFVS CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFWLMCSLAFVLGLALGSAQPNVMNILHTVSPSGRAGEALGLRSAVLNTSQVVWPLTFGV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH VGTALGMLPIFLSMAGAMGMAGYYSRKQSRKIALPD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TLPHAAVPPISWLIALTVCNHLAFNASRVVVSLFAISLKASTVTLGILMSLYALLPMFL CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIRAGKRIDEIGPRLPMTAGSLMVVAGTLLPAVWHDIASLYGACALIGVGFMLVQVAMQL HHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIGQVSTNETRLRNYTLHALGLSISGTLGPVAMGYMIEHAGYRAAFCVLVAIALVGQAGL HHHCCCCCCHHHHHEEEEEECEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH QYVRPRLPAQGGNAGRIAIEDGSRRSTLDLLQHPELRAVFIASAVLSAAWDLHAFLIPIQ HHHCCCCCCCCCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEEEC GTHIGLSPSSIGWVLGAFSIATLAIRVAMPMVSRHFSEWRIIRLALTVGAMAYLVYPFVS CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HFWLMCSLAFVLGLALGSAQPNVMNILHTVSPSGRAGEALGLRSAVLNTSQVVWPLTFGV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH VGTALGMLPIFLSMAGAMGMAGYYSRKQSRKIALPD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA