| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yhiN [H]
Identifier: 94311546
GI number: 94311546
Start: 2839530
End: 2840666
Strand: Reverse
Name: yhiN [H]
Synonym: Rmet_2610
Alternate gene names: 94311546
Gene position: 2840666-2839530 (Counterclockwise)
Preceding gene: 94311550
Following gene: 94311545
Centisome position: 72.32
GC content: 65.44
Gene sequence:
>1137_bases TTGATCGACCACGCCACGAAGCTGGCGGAGAAGATCCGTATTTCCGGCGGCGGGCGGTGCAATTTCACGAATCTCCAGGC CAGCCCGGCCAACTATTTGTCGTCCAACCCCCATTTCTGCCGCTCGGCGCTGGCGCGCTACACGCCGCAAGATTTCCTGG CGCTGATGCGCCGCTACGACATCGGTTGGCACGAGAAGCATCGCGGCCAACTGTTCTGCAATGACAGCGCCGAGGACGTG ATCAACCTGCTGCGCGCCGAGTGCGAGGCTGGCGGCGTGCGCTGGCAGACCGGCTGCAGCATCCATGAGGTCCGCCGCGA GGGTGCCGACTATCTGTTGCTGACATCCCAGGGCACGGTGCGAGTCGGCGCGCTGGTGGTGGCTACCGGTGGGCTGTCGA TCCCGAAGATCGGCGCAACGGACTTCGGCTATGCCATCGCCCGTCAGTTCGGCCTGAAAATCATCGACACGCGACCGGCC CTGGTACCGCTGACGTTCGATGGCCAGGCGTGGCAGCCGTTCGTGCCGTTGGCGGGGGTGTCGATGGAAGTCGATATATC CACCGGCAGCGGCAAGACCGCAGGCGCGTTCAAGGAAGACCTGCTGTGGACGCATCGGGGCTTGTCCGGACCGGCGGTCC TGCAGATCTCCAGCTACTGGCGCCCCGGCACGCCGATCGAGATTGACCTGTTCGATGGCGAGGACGCCGCCGCGTGGTTG ATCGGGCACAAGAAGAGCAGCCGCAAGCATCTGAACAATCTCCTGGGCGAGCGTCTGCCGTCGCGGCTGGCAGACGCATG GTGCGCGGCGGTGGGGCTGCAAGGCACGCAATCCGTGGCCGATATGCCGGATAAGGCACTGCGCCAGCTCGGCGAATCGC TTAATCGCTGGCGGCTGGTGCCGTCCGGCACCGAGGGCTACAAGAAGGCCGAAGTGACACTGGGTGGTGTCGATACGCGC GGACTGTCGTCGACCACGATGATGGCGCGCGAAGTCGACGGACTTTATTTCATTGGCGAGGTCGTGGACGTGACCGGATG GCTCGGCGGCTACAACTTCCAGTGGGCCTGGGCATCGGCGGTGGCGGCCGGGGAGGCCGTGGCCGAGGCGGCTCGTGGCG CAGGCGCTGTTACGTAG
Upstream 100 bases:
>100_bases TCAGGGCAGACAAGACCGGTTCGATGTGGCGGTGCTGGGCGCGGGAGCGGCCGGCATGATGTGTGCCGCCGTGGCCGGGC AGCGCGGCGCGCGCGTGGTG
Downstream 100 bases:
>100_bases GCGGCACGTGTCGGCCCTCGTGTCGGCCCTCGTGTTGGCCCGGGTGCCGGCCCTTACGTGCAGCTTGGCAGACCTTGCGC TAGAATCGTCGCTCTCGTAA
Product: putative oxidoreductase with FAD/NAD(P)-binding domain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MIDHATKLAEKIRISGGGRCNFTNLQASPANYLSSNPHFCRSALARYTPQDFLALMRRYDIGWHEKHRGQLFCNDSAEDV INLLRAECEAGGVRWQTGCSIHEVRREGADYLLLTSQGTVRVGALVVATGGLSIPKIGATDFGYAIARQFGLKIIDTRPA LVPLTFDGQAWQPFVPLAGVSMEVDISTGSGKTAGAFKEDLLWTHRGLSGPAVLQISSYWRPGTPIEIDLFDGEDAAAWL IGHKKSSRKHLNNLLGERLPSRLADAWCAAVGLQGTQSVADMPDKALRQLGESLNRWRLVPSGTEGYKKAEVTLGGVDTR GLSSTTMMAREVDGLYFIGEVVDVTGWLGGYNFQWAWASAVAAGEAVAEAARGAGAVT
Sequences:
>Translated_378_residues MIDHATKLAEKIRISGGGRCNFTNLQASPANYLSSNPHFCRSALARYTPQDFLALMRRYDIGWHEKHRGQLFCNDSAEDV INLLRAECEAGGVRWQTGCSIHEVRREGADYLLLTSQGTVRVGALVVATGGLSIPKIGATDFGYAIARQFGLKIIDTRPA LVPLTFDGQAWQPFVPLAGVSMEVDISTGSGKTAGAFKEDLLWTHRGLSGPAVLQISSYWRPGTPIEIDLFDGEDAAAWL IGHKKSSRKHLNNLLGERLPSRLADAWCAAVGLQGTQSVADMPDKALRQLGESLNRWRLVPSGTEGYKKAEVTLGGVDTR GLSSTTMMAREVDGLYFIGEVVDVTGWLGGYNFQWAWASAVAAGEAVAEAARGAGAVT >Mature_378_residues MIDHATKLAEKIRISGGGRCNFTNLQASPANYLSSNPHFCRSALARYTPQDFLALMRRYDIGWHEKHRGQLFCNDSAEDV INLLRAECEAGGVRWQTGCSIHEVRREGADYLLLTSQGTVRVGALVVATGGLSIPKIGATDFGYAIARQFGLKIIDTRPA LVPLTFDGQAWQPFVPLAGVSMEVDISTGSGKTAGAFKEDLLWTHRGLSGPAVLQISSYWRPGTPIEIDLFDGEDAAAWL IGHKKSSRKHLNNLLGERLPSRLADAWCAAVGLQGTQSVADMPDKALRQLGESLNRWRLVPSGTEGYKKAEVTLGGVDTR GLSSTTMMAREVDGLYFIGEVVDVTGWLGGYNFQWAWASAVAAGEAVAEAARGAGAVT
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=379, Percent_Identity=48.2849604221636, Blast_Score=349, Evalue=1e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 40795; Mature: 40795
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDHATKLAEKIRISGGGRCNFTNLQASPANYLSSNPHFCRSALARYTPQDFLALMRRYD CCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHC IGWHEKHRGQLFCNDSAEDVINLLRAECEAGGVRWQTGCSIHEVRREGADYLLLTSQGTV CCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCEEEEECCCCE RVGALVVATGGLSIPKIGATDFGYAIARQFGLKIIDTRPALVPLTFDGQAWQPFVPLAGV EEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCC SMEVDISTGSGKTAGAFKEDLLWTHRGLSGPAVLQISSYWRPGTPIEIDLFDGEDAAAWL EEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEE IGHKKSSRKHLNNLLGERLPSRLADAWCAAVGLQGTQSVADMPDKALRQLGESLNRWRLV EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHEEEC PSGTEGYKKAEVTLGGVDTRGLSSTTMMAREVDGLYFIGEVVDVTGWLGGYNFQWAWASA CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHCCCCCEEEHHHHH VAAGEAVAEAARGAGAVT HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIDHATKLAEKIRISGGGRCNFTNLQASPANYLSSNPHFCRSALARYTPQDFLALMRRYD CCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHC IGWHEKHRGQLFCNDSAEDVINLLRAECEAGGVRWQTGCSIHEVRREGADYLLLTSQGTV CCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCEEEEECCCCE RVGALVVATGGLSIPKIGATDFGYAIARQFGLKIIDTRPALVPLTFDGQAWQPFVPLAGV EEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCCCCCCCCC SMEVDISTGSGKTAGAFKEDLLWTHRGLSGPAVLQISSYWRPGTPIEIDLFDGEDAAAWL EEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEE IGHKKSSRKHLNNLLGERLPSRLADAWCAAVGLQGTQSVADMPDKALRQLGESLNRWRLV EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHEEEC PSGTEGYKKAEVTLGGVDTRGLSSTTMMAREVDGLYFIGEVVDVTGWLGGYNFQWAWASA CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHCCCCCEEEHHHHH VAAGEAVAEAARGAGAVT HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]