| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311529
Identifier: 94311529
GI number: 94311529
Start: 2819243
End: 2820481
Strand: Direct
Name: 94311529
Synonym: Rmet_2593
Alternate gene names: NA
Gene position: 2819243-2820481 (Clockwise)
Preceding gene: 94311527
Following gene: 335055614
Centisome position: 71.77
GC content: 66.83
Gene sequence:
>1239_bases ATGAAGCTGGCTGTGGTGACCTATGGAACCGAAGGCGACACGCGCCCGCTCGCGGCGCTTGCCCGGGCGTTGATCGACGC GGGTCATGAGGTGCATCTGCTGGCTGATGCCTCGACGCTGCATTCGGCCGAGGCACTCGACGTCCCGGCCTCTGCACTCA CGGGCGATATCCGCAAGGCGCTGGCGCCGGGGCAGGCACTGTCAAACGCGGTCTATCGCACGGGCGGATTCCAGGACACG AGTCGTGCGTTGGCTGCCATCGCCAATGCCAGCACGCCGGCCTGGATGCGCGAGGTCGCCGAGGCATCGGAGGGTTGCGA TGCGTTGATCATCTCCGGGCTGACCGCCTTTGTCGGCCTTTCCGTGGCCGAGTATCGCGGCATCCCAGCCATCGGTACCG GACTGATCCCCATCACGCCGACCGCGGACTTCGCTTCGCCCTTCCTGCCACCGGGCAAGGTGCCGCGATGGCTCAATCGC GCCAGCCACCGCCTGGTGAACGAACTGCTCTGGCAGGCATTCAAGAAATCCACCAACGCCGCGCGGGCCGATGTCTGCGG CCTGCCCGCACGCAAGCATGTCTGGAGCGATCATCCGATGCTCTACGGCGTGTCGCCAAGCCTGCTGCCACGCCCACGGG ACTGGGCTGCGAACGCATCCGTCTGCGGGCAATGGAGCGCCGCAGCGACCCACTGGATGCCGCCTCCAGCGCTCGAGGCA TTCCTCGCGGCGGGCGAAGCGCCCATCTACATCGGCTTCGGCAGCATGGCCGGGTTCGATCATGCGGCAACGACCGATGC GCTGATCACTGCCATCGCTGGCCGGCGCGCGCTGTTCTATCCGGGCTGGAGCGGCATTGATGGGGCGTCATTGCCGAAGA ACTTCTTCGTCGTGGGCGAGACCCCGCATCATTGGCTCTTCCCCCGGACGTCGATGGCGATTCATCACGCCGGATCGGGT ACCTCGCATTCGGCGGCGCGGGCCGGCATACCGTCGGTGGCGGTGCCGTTCGCGGGCGATCAGTTCTTCTGGGCGCAGCG GCTACGGGACGCCGGCGTGGCCGGCGATCCGGTTCCAGGCAAACGGCTGCGGGCTTCCATGCTGGCGCAGGCGATTGCAT TCGCACAACGGCCAGAGGTGCGTGATCGCGCCCGGGCACTTGGCGAACGCATGGCGCAGGAGGATGGATTGGTTGCGGCT GTTGGCACCATCGAACGTCTGGTAGCGGCCAGTCTGTGA
Upstream 100 bases:
>100_bases GCGTGACGAACGACTGCATGTCCGTTCGTGCAGACAAGGTCCTCGCAACCATGAATGCCATAATCGCCTCTCACAGGGCC GTACGACGCAAAGGTGAACG
Downstream 100 bases:
>100_bases TCCGGCCCCGCGCGCTACGTCCAGCCCGATGCCGGCGATTGCCAATAGCGTGCAGCGGGACACGACGTCCCGCTGCACGC ATGATGACCGCGGTATCCAG
Product: glycosyltransferase (family 28)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MKLAVVTYGTEGDTRPLAALARALIDAGHEVHLLADASTLHSAEALDVPASALTGDIRKALAPGQALSNAVYRTGGFQDT SRALAAIANASTPAWMREVAEASEGCDALIISGLTAFVGLSVAEYRGIPAIGTGLIPITPTADFASPFLPPGKVPRWLNR ASHRLVNELLWQAFKKSTNAARADVCGLPARKHVWSDHPMLYGVSPSLLPRPRDWAANASVCGQWSAAATHWMPPPALEA FLAAGEAPIYIGFGSMAGFDHAATTDALITAIAGRRALFYPGWSGIDGASLPKNFFVVGETPHHWLFPRTSMAIHHAGSG TSHSAARAGIPSVAVPFAGDQFFWAQRLRDAGVAGDPVPGKRLRASMLAQAIAFAQRPEVRDRARALGERMAQEDGLVAA VGTIERLVAASL
Sequences:
>Translated_412_residues MKLAVVTYGTEGDTRPLAALARALIDAGHEVHLLADASTLHSAEALDVPASALTGDIRKALAPGQALSNAVYRTGGFQDT SRALAAIANASTPAWMREVAEASEGCDALIISGLTAFVGLSVAEYRGIPAIGTGLIPITPTADFASPFLPPGKVPRWLNR ASHRLVNELLWQAFKKSTNAARADVCGLPARKHVWSDHPMLYGVSPSLLPRPRDWAANASVCGQWSAAATHWMPPPALEA FLAAGEAPIYIGFGSMAGFDHAATTDALITAIAGRRALFYPGWSGIDGASLPKNFFVVGETPHHWLFPRTSMAIHHAGSG TSHSAARAGIPSVAVPFAGDQFFWAQRLRDAGVAGDPVPGKRLRASMLAQAIAFAQRPEVRDRARALGERMAQEDGLVAA VGTIERLVAASL >Mature_412_residues MKLAVVTYGTEGDTRPLAALARALIDAGHEVHLLADASTLHSAEALDVPASALTGDIRKALAPGQALSNAVYRTGGFQDT SRALAAIANASTPAWMREVAEASEGCDALIISGLTAFVGLSVAEYRGIPAIGTGLIPITPTADFASPFLPPGKVPRWLNR ASHRLVNELLWQAFKKSTNAARADVCGLPARKHVWSDHPMLYGVSPSLLPRPRDWAANASVCGQWSAAATHWMPPPALEA FLAAGEAPIYIGFGSMAGFDHAATTDALITAIAGRRALFYPGWSGIDGASLPKNFFVVGETPHHWLFPRTSMAIHHAGSG TSHSAARAGIPSVAVPFAGDQFFWAQRLRDAGVAGDPVPGKRLRASMLAQAIAFAQRPEVRDRARALGERMAQEDGLVAA VGTIERLVAASL
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae L518_C2_147 and M.tuberculosis Rv1524 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6323218, Length=431, Percent_Identity=29.4663573085847, Blast_Score=182, Evalue=7e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004276 [H]
Pfam domain/function: PF03033 Glyco_transf_28 [H]
EC number: NA
Molecular weight: Translated: 43364; Mature: 43364
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAVVTYGTEGDTRPLAALARALIDAGHEVHLLADASTLHSAEALDVPASALTGDIRKA CEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHCCCHHHHHHHHHHH LAPGQALSNAVYRTGGFQDTSRALAAIANASTPAWMREVAEASEGCDALIISGLTAFVGL HCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH SVAEYRGIPAIGTGLIPITPTADFASPFLPPGKVPRWLNRASHRLVNELLWQAFKKSTNA HHHHHCCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ARADVCGLPARKHVWSDHPMLYGVSPSLLPRPRDWAANASVCGQWSAAATHWMPPPALEA CHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCHHHHH FLAAGEAPIYIGFGSMAGFDHAATTDALITAIAGRRALFYPGWSGIDGASLPKNFFVVGE HHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEECC TPHHWLFPRTSMAIHHAGSGTSHSAARAGIPSVAVPFAGDQFFWAQRLRDAGVAGDPVPG CCCCEECCCCCEEEEECCCCCCCCHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCH KRLRASMLAQAIAFAQRPEVRDRARALGERMAQEDGLVAAVGTIERLVAASL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCC >Mature Secondary Structure MKLAVVTYGTEGDTRPLAALARALIDAGHEVHLLADASTLHSAEALDVPASALTGDIRKA CEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHCCCHHHHHHHHHHH LAPGQALSNAVYRTGGFQDTSRALAAIANASTPAWMREVAEASEGCDALIISGLTAFVGL HCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH SVAEYRGIPAIGTGLIPITPTADFASPFLPPGKVPRWLNRASHRLVNELLWQAFKKSTNA HHHHHCCCCCCCCCCEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC ARADVCGLPARKHVWSDHPMLYGVSPSLLPRPRDWAANASVCGQWSAAATHWMPPPALEA CHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHCCCCHHHCCCCCCCHHHHH FLAAGEAPIYIGFGSMAGFDHAATTDALITAIAGRRALFYPGWSGIDGASLPKNFFVVGE HHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEECC TPHHWLFPRTSMAIHHAGSGTSHSAARAGIPSVAVPFAGDQFFWAQRLRDAGVAGDPVPG CCCCEECCCCCEEEEECCCCCCCCHHHCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCH KRLRASMLAQAIAFAQRPEVRDRARALGERMAQEDGLVAAVGTIERLVAASL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]