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The map label for this gene is tnpA [C]

Identifier: 94311493

GI number: 94311493

Start: 2780834

End: 2781235

Strand: Reverse

Name: tnpA [C]

Synonym: Rmet_2557

Alternate gene names: 94311493

Gene position: 2781235-2780834 (Counterclockwise)

Preceding gene: 335055609

Following gene: 94311492

Centisome position: 70.8

GC content: 59.2

Gene sequence:

>402_bases
GTGACTAGTTTCAAGCCTAGGCAAATCGTGGAAAGCATCGAAATTCTTACCGAACCTGAGCGGCGGCGGCGCCGTTCAGT
CCAAGAAAAGCTCGCCATCGTTCAGGAAACGATGGAGCCGGGTGCCACGGTTTCGGCGGTTGCCCGACGGCATGGGCTCA
ATCCCAATCAGGTGTTCGCATGGCGCAAGCAATACCAGGAAGGAAGCCTGGCCGCTGTGAGCGCTGGCGAAGCTGTGGTC
CCGGCCTCGCAGTTGGCTGCAGCGATGAAGGAGATCAGGGAACTGCAGCGGCTACTCGGAAAGAAAACGCAGGAAGCCGA
GATCCTGAAGGAAGCCGTGGAGTACGGGCGCTCAAAAAACTGGATTGCGCGCTCGCCCTTACTGCCCGGGGACGACCAAT
GA

Upstream 100 bases:

>100_bases
AACATGAAACTCCCCTTCCGGCAACTTGATGTCGGGGAATGGTGGAGCGGCCCCTTGAATCTCAGGACACCCGGCACCTC
TTACAATAAGAGGTAGTCTT

Downstream 100 bases:

>100_bases
AGACGGTCTGCGATGTCCTTGGCGTGGCGCGCTCTGCGGTGGCAGCGAAACAGGCCCGTTCGTCGGAATGGCGGGATGGC
CGCCGCGCCCGCCAATACGA

Product: transposase IS1087B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTSFKPRQIVESIEILTEPERRRRRSVQEKLAIVQETMEPGATVSAVARRHGLNPNQVFAWRKQYQEGSLAAVSAGEAVV
PASQLAAAMKEIRELQRLLGKKTQEAEILKEAVEYGRSKNWIARSPLLPGDDQ

Sequences:

>Translated_133_residues
MTSFKPRQIVESIEILTEPERRRRRSVQEKLAIVQETMEPGATVSAVARRHGLNPNQVFAWRKQYQEGSLAAVSAGEAVV
PASQLAAAMKEIRELQRLLGKKTQEAEILKEAVEYGRSKNWIARSPLLPGDDQ
>Mature_132_residues
TSFKPRQIVESIEILTEPERRRRRSVQEKLAIVQETMEPGATVSAVARRHGLNPNQVFAWRKQYQEGSLAAVSAGEAVVP
ASQLAAAMKEIRELQRLLGKKTQEAEILKEAVEYGRSKNWIARSPLLPGDDQ

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI145693215, Length=121, Percent_Identity=71.0743801652893, Blast_Score=178, Evalue=1e-46,
Organism=Escherichia coli, GI145693180, Length=121, Percent_Identity=71.0743801652893, Blast_Score=178, Evalue=1e-46,
Organism=Escherichia coli, GI145693177, Length=121, Percent_Identity=71.0743801652893, Blast_Score=178, Evalue=1e-46,
Organism=Escherichia coli, GI145693154, Length=121, Percent_Identity=71.0743801652893, Blast_Score=178, Evalue=1e-46,
Organism=Escherichia coli, GI145693126, Length=121, Percent_Identity=71.0743801652893, Blast_Score=178, Evalue=1e-46,
Organism=Escherichia coli, GI145693097, Length=121, Percent_Identity=71.0743801652893, Blast_Score=178, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 14922; Mature: 14791

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFKPRQIVESIEILTEPERRRRRSVQEKLAIVQETMEPGATVSAVARRHGLNPNQVFA
CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
WRKQYQEGSLAAVSAGEAVVPASQLAAAMKEIRELQRLLGKKTQEAEILKEAVEYGRSKN
HHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
WIARSPLLPGDDQ
CCCCCCCCCCCCC
>Mature Secondary Structure 
TSFKPRQIVESIEILTEPERRRRRSVQEKLAIVQETMEPGATVSAVARRHGLNPNQVFA
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH
WRKQYQEGSLAAVSAGEAVVPASQLAAAMKEIRELQRLLGKKTQEAEILKEAVEYGRSKN
HHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
WIARSPLLPGDDQ
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA