| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is rseA
Identifier: 94311360
GI number: 94311360
Start: 2634526
End: 2635182
Strand: Reverse
Name: rseA
Synonym: Rmet_2424
Alternate gene names: NA
Gene position: 2635182-2634526 (Counterclockwise)
Preceding gene: 94311361
Following gene: 94311359
Centisome position: 67.09
GC content: 63.93
Gene sequence:
>657_bases ATGGGTCAGGCTCATAAGCAGTCGGTTCATGTAATGGAAGCCGCGGAGCAGATCTCCGCATTGATGGACGGCGAGCTGGC GCCGCACGACGTGGATGCCGCGCTCGGCCTTGCCAAAGACGACGCTGGTATGGCCGACTGGTCGATGTACCAGTTGATCG GCGATGCGATGCGTTCGGAAGAGTTGACGCACGCAGGGTCGACCGAAGCCTTCCTCTCCCGATTCTCCGCGCAGCTTGAA GCCGAGCCGCATGTGCTGGTGCCGGCTGTCGCGCAGGCTGGCCGTCATCGACTGCTGGTGCGTCCATCGTGGGTGCGCCG TGTGGTGCCGGGTACCGCGATTGCCGCCGCAGTGGCTGCTGTGAGCTGGGTCGTGGTGCCGCAGATGCGTGGGCCAGGCG GTGTGGGCGCTCCGGATGCTGTGGTTGCAAGCGTCGAGCAACCGGCCGGTGCGACGGTAAAGGCTGGCGTTGCTGCGCCG GCGGCCGCGGGTTCGATCATGGCGGTCTCCGCCGATAGTGCCCAGATGATTCGCGATCCCCGTCTCGATGAATACCTGCG TGCCCATCGCACGTCGGTCGCAACCGATGCCTTTGTGCCGACCATGCGTACGGTGGTGAATGGTGTCAACTTCTCTCAGG ACAATTCGCAGGAATAA
Upstream 100 bases:
>100_bases ATGTCGTGCAGCCAGCGTTGCAGCCTATTCCTGCATCGATAAACGACAAGCAGTAGTGACGGGATTTATCGGTGTTCGAT GGAATTTCTTGGGGTTGGAA
Downstream 100 bases:
>100_bases TGCCGGACATGCATAAAGGACCGTCGCTCGCCAATGCAGCGGGCGTACACGGAAAGAAGGGCCTGCGGAGGTCCTTTTTT CTGGCCTTATGTCTGACCGC
Product: anti-sigma factor, negative regulator of sigma24 activity
Products: NA
Alternate protein names: Sigma-E Factor Negative Regulatory Protein; Anti Sigma-E Protein RseA N-Terminal
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MGQAHKQSVHVMEAAEQISALMDGELAPHDVDAALGLAKDDAGMADWSMYQLIGDAMRSEELTHAGSTEAFLSRFSAQLE AEPHVLVPAVAQAGRHRLLVRPSWVRRVVPGTAIAAAVAAVSWVVVPQMRGPGGVGAPDAVVASVEQPAGATVKAGVAAP AAAGSIMAVSADSAQMIRDPRLDEYLRAHRTSVATDAFVPTMRTVVNGVNFSQDNSQE
Sequences:
>Translated_218_residues MGQAHKQSVHVMEAAEQISALMDGELAPHDVDAALGLAKDDAGMADWSMYQLIGDAMRSEELTHAGSTEAFLSRFSAQLE AEPHVLVPAVAQAGRHRLLVRPSWVRRVVPGTAIAAAVAAVSWVVVPQMRGPGGVGAPDAVVASVEQPAGATVKAGVAAP AAAGSIMAVSADSAQMIRDPRLDEYLRAHRTSVATDAFVPTMRTVVNGVNFSQDNSQE >Mature_217_residues GQAHKQSVHVMEAAEQISALMDGELAPHDVDAALGLAKDDAGMADWSMYQLIGDAMRSEELTHAGSTEAFLSRFSAQLEA EPHVLVPAVAQAGRHRLLVRPSWVRRVVPGTAIAAAVAAVSWVVVPQMRGPGGVGAPDAVVASVEQPAGATVKAGVAAPA AAGSIMAVSADSAQMIRDPRLDEYLRAHRTSVATDAFVPTMRTVVNGVNFSQDNSQE
Specific function: Unknown
COG id: COG3073
COG function: function code T; Negative regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22755; Mature: 22624
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQAHKQSVHVMEAAEQISALMDGELAPHDVDAALGLAKDDAGMADWSMYQLIGDAMRSE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ELTHAGSTEAFLSRFSAQLEAEPHVLVPAVAQAGRHRLLVRPSWVRRVVPGTAIAAAVAA HHHCCCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHH VSWVVVPQMRGPGGVGAPDAVVASVEQPAGATVKAGVAAPAAAGSIMAVSADSAQMIRDP HHHHEEECCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCHHHHHCC RLDEYLRAHRTSVATDAFVPTMRTVVNGVNFSQDNSQE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GQAHKQSVHVMEAAEQISALMDGELAPHDVDAALGLAKDDAGMADWSMYQLIGDAMRSE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ELTHAGSTEAFLSRFSAQLEAEPHVLVPAVAQAGRHRLLVRPSWVRRVVPGTAIAAAVAA HHHCCCCHHHHHHHHHHHHCCCCCEEEHHHHHCCCCEEEECHHHHHHHCCCHHHHHHHHH VSWVVVPQMRGPGGVGAPDAVVASVEQPAGATVKAGVAAPAAAGSIMAVSADSAQMIRDP HHHHEEECCCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCHHHHHCC RLDEYLRAHRTSVATDAFVPTMRTVVNGVNFSQDNSQE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA