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The map label for this gene is traR [C]

Identifier: 94311338

GI number: 94311338

Start: 2611675

End: 2612331

Strand: Direct

Name: traR [C]

Synonym: Rmet_2402

Alternate gene names: 94311338

Gene position: 2611675-2612331 (Clockwise)

Preceding gene: 94311336

Following gene: 94311340

Centisome position: 66.49

GC content: 59.06

Gene sequence:

>657_bases
ATGCATGATGCCACCAGCCAGTTTCCCCATCTCAGGCTTGCGATAGCACCTGGGGTGCCATCCTCATGCTTCTCCTCGCT
TCTCGCCCTGCAACGCGCGGAAGAGCCGGAAATCACTATCGCGTTCTTTGAGACATCAAGTGACGACCTGGTGACGGGCA
TTGATGAAGGTCGTTACGACGCAGGAATGTCGCTTCGGGCCGTAAGCGCTCCGTCTCTGAAAAGCCAACCCTTGTGGATC
GAGAACATCGCTGTTGCCATGCCATTGTGGTCCCCCTTGCTCGCCCAGACAAAGCTTACGATCGCCGAACTTTTGGACTA
CCCCGTGTTTCGCTGGCCGGCAGAAAGCTGCTCACTACTGGATCAGCGGCTGTCATCCCTCCCGTCTTTAAGCCGGCAGA
GCGTCCAGCATGTGACCTCGTTCGACATGTTGGCGCTATGGGTCGGCGCTGGCTATGGTGTCGGGATCACCGCGCAATCG
CGCATCGAGCGCGCTGATGCATGGGGGATCACCGCCCGGCCGCTGGCCGAGGGGCCCTACGAGGTCGTGACTCATCTGCA
GCGCCTCAAAGGACGAACTAACGCGGTTTCTGAGCGGTTCGAGCGCAGAGCGATGCAGGTAGCCAAGGATAGTGCAGTCC
AATCGAATACCCGATAG

Upstream 100 bases:

>100_bases
TCTGCCAAAATTAACCACGTTAAAGATAACGGCGTTAAACTTCACTCTTGACCACGATGCAAGTTCACCTACTCGGCCAG
AACACTTTTTGGGGGCTCGC

Downstream 100 bases:

>100_bases
CGCGCCCGCGCTGAGCGTTCCCTGATGTGCAGACGCCAGGCGTCCGGCGATCTGCTGGACATGCATGATCGTCTGCTCGA
TTTCTCGACGGCGCATACCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Regulatory Protein; Transcriptional Regulator Lysr Family; LysR Family Regulatory Protein; Transcriptional Regulator LysR Family Protein; LysR Family Regulatory Helix-Turn-Helix Protein; BphR/TraR; Transcription Regulator Protein; Transcription Regulator; Regulatory Protein BphR

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MHDATSQFPHLRLAIAPGVPSSCFSSLLALQRAEEPEITIAFFETSSDDLVTGIDEGRYDAGMSLRAVSAPSLKSQPLWI
ENIAVAMPLWSPLLAQTKLTIAELLDYPVFRWPAESCSLLDQRLSSLPSLSRQSVQHVTSFDMLALWVGAGYGVGITAQS
RIERADAWGITARPLAEGPYEVVTHLQRLKGRTNAVSERFERRAMQVAKDSAVQSNTR

Sequences:

>Translated_218_residues
MHDATSQFPHLRLAIAPGVPSSCFSSLLALQRAEEPEITIAFFETSSDDLVTGIDEGRYDAGMSLRAVSAPSLKSQPLWI
ENIAVAMPLWSPLLAQTKLTIAELLDYPVFRWPAESCSLLDQRLSSLPSLSRQSVQHVTSFDMLALWVGAGYGVGITAQS
RIERADAWGITARPLAEGPYEVVTHLQRLKGRTNAVSERFERRAMQVAKDSAVQSNTR
>Mature_218_residues
MHDATSQFPHLRLAIAPGVPSSCFSSLLALQRAEEPEITIAFFETSSDDLVTGIDEGRYDAGMSLRAVSAPSLKSQPLWI
ENIAVAMPLWSPLLAQTKLTIAELLDYPVFRWPAESCSLLDQRLSSLPSLSRQSVQHVTSFDMLALWVGAGYGVGITAQS
RIERADAWGITARPLAEGPYEVVTHLQRLKGRTNAVSERFERRAMQVAKDSAVQSNTR

Specific function: Positive Regulatory Protein For The Cyn Operon. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23955; Mature: 23955

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDATSQFPHLRLAIAPGVPSSCFSSLLALQRAEEPEITIAFFETSSDDLVTGIDEGRYD
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCCCC
AGMSLRAVSAPSLKSQPLWIENIAVAMPLWSPLLAQTKLTIAELLDYPVFRWPAESCSLL
CCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
DQRLSSLPSLSRQSVQHVTSFDMLALWVGAGYGVGITAQSRIERADAWGITARPLAEGPY
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHH
EVVTHLQRLKGRTNAVSERFERRAMQVAKDSAVQSNTR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHDATSQFPHLRLAIAPGVPSSCFSSLLALQRAEEPEITIAFFETSSDDLVTGIDEGRYD
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCCCC
AGMSLRAVSAPSLKSQPLWIENIAVAMPLWSPLLAQTKLTIAELLDYPVFRWPAESCSLL
CCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
DQRLSSLPSLSRQSVQHVTSFDMLALWVGAGYGVGITAQSRIERADAWGITARPLAEGPY
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHH
EVVTHLQRLKGRTNAVSERFERRAMQVAKDSAVQSNTR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA