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The map label for this gene is ugpA [C]

Identifier: 94311170

GI number: 94311170

Start: 2447302

End: 2448186

Strand: Reverse

Name: ugpA [C]

Synonym: Rmet_2232

Alternate gene names: 94311170

Gene position: 2448186-2447302 (Counterclockwise)

Preceding gene: 94311171

Following gene: 94311169

Centisome position: 62.33

GC content: 63.84

Gene sequence:

>885_bases
ATGAAGCCCGTCAACCAGAAGGCCTGGCTGCTGGTGCTGCCAGTGGTGCTGTGCGTGGCGTTCTCGGCCATCCTGCCATT
GATGACGATCGTCAATTACTCGGTGCAGGACATCATCTCGCCTGATCGGCGGGTGTTCGTCGGCACCGAATGGTTCCGCA
CCGTTCTCCGGGACGAGGAACTGCATGGCGCGCTGTTCCGCCAGCTCGGTTTCTCGCTGGCCGTGCTGTGCGTGGAGATT
CCGCTCGGCATCCTGCTGGCGCTGTCGATGCCGGCCAAGGGCTGGAAGGCATCGGCGACGCTGGTCATCATCGCGCTGTC
GCTGCTGATTCCCTGGAACGTGGTCGGCACGATCTGGCAGATCTTTGGCCGTACCGATATCGGCCTGCTCGGGGCCGCGC
TCGACGGGCTAGGCTTCGCCTACAACTACACCGGTAGCGCGTTCGACGCCTGGGTTACCGTGCTCGTCATGGACGTGTGG
CACTGGACACCCCTGGTGGCATTGCTCTGCTACGCGGGGCTGCGGGCCATCCCGGATGCCTACTACCAGGCGGCGCAGAT
CGACGGCGCATCGCGCTTCGCGGTGTTCCGCTTCATCCAGTTGCCGAAGCTGCGCGGTGTGCTGATGATCGCGGTGCTGC
TGCGCTTCATGGACAGCTTCATGATCTACACGGAGCCGTTCGTGCTGACCGGCGGCGGGCCTGGGAATGCCACCACGTTC
CTGTCGCAATACCTGACGCAGAAGGCGGTAGGCCAGTTCGACCTGGGGCCGGCCGCGGCGTTCTCGATCGTCTACTTCCT
GATCATCCTGCTGACCTGCTTCATCCTCTACAACTGGATGCAACGCGCCGGCACGGCGGGCGCCGAGGAGATTCCGAATG
GCTGA

Upstream 100 bases:

>100_bases
GGCTGGGAACCGAGGCCGCGCATCTGCGCGCTGGCGATACCGCGTGGTTGTCGGTGTTCAACCGGCATACCTGCTTCTAC
GTCAACGAGGAACTGGTCCA

Downstream 100 bases:

>100_bases
GCATGTGCTTCCGGGCCAGCGCGCCAGCTGGTGGCGGCCTGTATTCCTGACCACCTACCTGTTGTTCGCGATCGTGCCGA
TCTACTGGATGGTGAACATG

Product: ABC-type sugar transport systems permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKPVNQKAWLLVLPVVLCVAFSAILPLMTIVNYSVQDIISPDRRVFVGTEWFRTVLRDEELHGALFRQLGFSLAVLCVEI
PLGILLALSMPAKGWKASATLVIIALSLLIPWNVVGTIWQIFGRTDIGLLGAALDGLGFAYNYTGSAFDAWVTVLVMDVW
HWTPLVALLCYAGLRAIPDAYYQAAQIDGASRFAVFRFIQLPKLRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNATTF
LSQYLTQKAVGQFDLGPAAAFSIVYFLIILLTCFILYNWMQRAGTAGAEEIPNG

Sequences:

>Translated_294_residues
MKPVNQKAWLLVLPVVLCVAFSAILPLMTIVNYSVQDIISPDRRVFVGTEWFRTVLRDEELHGALFRQLGFSLAVLCVEI
PLGILLALSMPAKGWKASATLVIIALSLLIPWNVVGTIWQIFGRTDIGLLGAALDGLGFAYNYTGSAFDAWVTVLVMDVW
HWTPLVALLCYAGLRAIPDAYYQAAQIDGASRFAVFRFIQLPKLRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNATTF
LSQYLTQKAVGQFDLGPAAAFSIVYFLIILLTCFILYNWMQRAGTAGAEEIPNG
>Mature_294_residues
MKPVNQKAWLLVLPVVLCVAFSAILPLMTIVNYSVQDIISPDRRVFVGTEWFRTVLRDEELHGALFRQLGFSLAVLCVEI
PLGILLALSMPAKGWKASATLVIIALSLLIPWNVVGTIWQIFGRTDIGLLGAALDGLGFAYNYTGSAFDAWVTVLVMDVW
HWTPLVALLCYAGLRAIPDAYYQAAQIDGASRFAVFRFIQLPKLRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNATTF
LSQYLTQKAVGQFDLGPAAAFSIVYFLIILLTCFILYNWMQRAGTAGAEEIPNG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=288, Percent_Identity=27.4305555555556, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787570, Length=239, Percent_Identity=26.7782426778243, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32366; Mature: 32366

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVNQKAWLLVLPVVLCVAFSAILPLMTIVNYSVQDIISPDRRVFVGTEWFRTVLRDEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHH
LHGALFRQLGFSLAVLCVEIPLGILLALSMPAKGWKASATLVIIALSLLIPWNVVGTIWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IFGRTDIGLLGAALDGLGFAYNYTGSAFDAWVTVLVMDVWHWTPLVALLCYAGLRAIPDA
HHCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYQAAQIDGASRFAVFRFIQLPKLRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNATTF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH
LSQYLTQKAVGQFDLGPAAAFSIVYFLIILLTCFILYNWMQRAGTAGAEEIPNG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKPVNQKAWLLVLPVVLCVAFSAILPLMTIVNYSVQDIISPDRRVFVGTEWFRTVLRDEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHH
LHGALFRQLGFSLAVLCVEIPLGILLALSMPAKGWKASATLVIIALSLLIPWNVVGTIWQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IFGRTDIGLLGAALDGLGFAYNYTGSAFDAWVTVLVMDVWHWTPLVALLCYAGLRAIPDA
HHCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYQAAQIDGASRFAVFRFIQLPKLRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNATTF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHH
LSQYLTQKAVGQFDLGPAAAFSIVYFLIILLTCFILYNWMQRAGTAGAEEIPNG
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]