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The map label for this gene is yurM [H]

Identifier: 94311169

GI number: 94311169

Start: 2446479

End: 2447309

Strand: Reverse

Name: yurM [H]

Synonym: Rmet_2231

Alternate gene names: 94311169

Gene position: 2447309-2446479 (Counterclockwise)

Preceding gene: 94311170

Following gene: 94311168

Centisome position: 62.3

GC content: 61.97

Gene sequence:

>831_bases
ATGGCTGAGCATGTGCTTCCGGGCCAGCGCGCCAGCTGGTGGCGGCCTGTATTCCTGACCACCTACCTGTTGTTCGCGAT
CGTGCCGATCTACTGGATGGTGAACATGTCGTTCAAGACCAATGAGGAGATCGTCTCGACACTCTCGCTCTGGCCGGCAT
CGTTCACGCTCGAGCACTACGTGACGATCTTCACCGACGCGTCGTGGTACTCGGGCTACATCAACTCGATGATCTACGTG
GTCCTGAATACGGTGATATCGATCGGCGTGGCGCTCCCGGCCGCCTACGCGTTCTCGCGCTACCAGTTCATCGGCGACAA
GCACGTGTTTTTCTGGCTGCTGACCAACCGCATGACGCCGCCCGCGGTGTTCCTGCTGCCGTTCTTCCAGCTCTACACGA
CGATCGGCCTGATGGATACACACCTTGGCGTGGCGCTGGCGCATCTGGTGTTCAACGTGCCGCTTGCGGTTTGGATCCTG
GAGGGTTTCATGTCGGGCGTGCCACGCGAGATCGACGAAACCGCCTACGTTGACGGCTACTCGTTCCCGCGGTTCTTCCT
GACGATCTTCCTGCCGCTGATCAAGGCCGGCGTGGGCGTGGCGGCGTTCTTCTGCTTCATGTTCAGTTGGGTGGAGCTGC
TACTGGCGCGGACGCTGACGTCCGTCAACGCCAAGCCGATCGTGGCGACGATGACGCGCACGGTGTCGGCGTCGGGCATG
GATTGGGGCGTGCTGGCAGCGGCCGGCGTGCTGACCATCGTGCCGGGCGCCATCGTGATCTGGTTCGTGCGGCACTACAT
CGCGAAAGGCTTCGCGATGGGCCGCGTTTGA

Upstream 100 bases:

>100_bases
GCGTTCTCGATCGTCTACTTCCTGATCATCCTGCTGACCTGCTTCATCCTCTACAACTGGATGCAACGCGCCGGCACGGC
GGGCGCCGAGGAGATTCCGA

Downstream 100 bases:

>100_bases
GGGAGGCACCGATGCTGAGCTGGATGGTGTGGACCACGCCCGTGGCGGTGTTCTTTGCCGCGGTGGTGGTGATGCTGATC
GGCATGACGATCTGGGAAAC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MAEHVLPGQRASWWRPVFLTTYLLFAIVPIYWMVNMSFKTNEEIVSTLSLWPASFTLEHYVTIFTDASWYSGYINSMIYV
VLNTVISIGVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAVFLLPFFQLYTTIGLMDTHLGVALAHLVFNVPLAVWIL
EGFMSGVPREIDETAYVDGYSFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGM
DWGVLAAAGVLTIVPGAIVIWFVRHYIAKGFAMGRV

Sequences:

>Translated_276_residues
MAEHVLPGQRASWWRPVFLTTYLLFAIVPIYWMVNMSFKTNEEIVSTLSLWPASFTLEHYVTIFTDASWYSGYINSMIYV
VLNTVISIGVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAVFLLPFFQLYTTIGLMDTHLGVALAHLVFNVPLAVWIL
EGFMSGVPREIDETAYVDGYSFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGM
DWGVLAAAGVLTIVPGAIVIWFVRHYIAKGFAMGRV
>Mature_275_residues
AEHVLPGQRASWWRPVFLTTYLLFAIVPIYWMVNMSFKTNEEIVSTLSLWPASFTLEHYVTIFTDASWYSGYINSMIYVV
LNTVISIGVALPAAYAFSRYQFIGDKHVFFWLLTNRMTPPAVFLLPFFQLYTTIGLMDTHLGVALAHLVFNVPLAVWILE
GFMSGVPREIDETAYVDGYSFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGMD
WGVLAAAGVLTIVPGAIVIWFVRHYIAKGFAMGRV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=262, Percent_Identity=27.8625954198473, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1790464, Length=209, Percent_Identity=25.3588516746411, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1789860, Length=273, Percent_Identity=22.3443223443223, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31020; Mature: 30889

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEHVLPGQRASWWRPVFLTTYLLFAIVPIYWMVNMSFKTNEEIVSTLSLWPASFTLEHY
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH
VTIFTDASWYSGYINSMIYVVLNTVISIGVALPAAYAFSRYQFIGDKHVFFWLLTNRMTP
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
PAVFLLPFFQLYTTIGLMDTHLGVALAHLVFNVPLAVWILEGFMSGVPREIDETAYVDGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHCCCCC
SFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
DWGVLAAAGVLTIVPGAIVIWFVRHYIAKGFAMGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEHVLPGQRASWWRPVFLTTYLLFAIVPIYWMVNMSFKTNEEIVSTLSLWPASFTLEHY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH
VTIFTDASWYSGYINSMIYVVLNTVISIGVALPAAYAFSRYQFIGDKHVFFWLLTNRMTP
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
PAVFLLPFFQLYTTIGLMDTHLGVALAHLVFNVPLAVWILEGFMSGVPREIDETAYVDGY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHCCCCC
SFPRFFLTIFLPLIKAGVGVAAFFCFMFSWVELLLARTLTSVNAKPIVATMTRTVSASGM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
DWGVLAAAGVLTIVPGAIVIWFVRHYIAKGFAMGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]