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The map label for this gene is arnT

Identifier: 94311076

GI number: 94311076

Start: 2326049

End: 2327851

Strand: Direct

Name: arnT

Synonym: Rmet_2138

Alternate gene names: NA

Gene position: 2326049-2327851 (Clockwise)

Preceding gene: 94311075

Following gene: 94311077

Centisome position: 59.22

GC content: 65.83

Gene sequence:

>1803_bases
ATGCCTTACCATCTGCCGATGAGCCAAGCCAAGACTTCTCCCGTCCATCTGACTGCCGCTGCTACCGGTGCCCTCCCGCG
TGCACTGCTGCTGGCGATCTGCATCATCTATGGACTGGCTGGCCTGTTCGGCCGCGACCCCTGGAAAAACGAGGATGCCG
CCGGATTCGGCGTGATGTGGCAACTCGGCAGCGGCGGCCTGCAGGACTGGCTCATGCCGAACATCGTCGGCCGCCCCTAC
AGCGACGACGGCCCACTCGTATTCTGGATCGGCGGCGGCATGATCCGCCTGCTTGGCGGCTGGCTCGGCGCGCCGGATGC
GGCAAGACTCGCCACCGCGCTGTTCTACTTCGCCACCTGCGCGCTGATCTGGTACTCGACCTACCTGCTGGGCCGCCGCG
ACGAGGTGCAGCCCTTCGCCTTTGCCTTCGGCGGTCAGCCTGACGCGCGGTCCTACGGACGCGCGCTCGCCGATGGGGCC
CTGCTGATCTTCCTGGCCTGCGTTGGCCTGGCGTTGCGCGGCCACGAAACCACCGCGCAGGTCGGCCAGGTCTGCTTCAT
CGCCTTCACCTTGTACGGCCTCGTGCGCAGCCTTGACAAGCCGGTACAGGGCAGCCTCTGGTTCGGCGTCGGGCTTGGTG
CCCTGTGCCTGGCCAGCGGGCCGATCCTGCCGCTGGTATTGCTTGCCGCAACACTCATTGCCGGATTGATCTGCCGACCG
CTGCCGCTGATGCGGCTGCTGACGATCGGGGCGCCGCTTGGCGTTCTCATCATTGCCGTATGGATGGCCACGGTATATTT
CGGTGCCACCGTCACGGACGATGCCGTGACCTATATTCGCGAGTGGGCTCGCTACGACCGCCACACCTACGGCCCGCCTT
CGCTGGCAGCCGCCGGCTTCATCGCACGCAACTTCTTCCTGTTCTCGTGGCCGGTCTGGCCGATTGCCGCCTTTGCGTGG
CTGTCGTGGCGCGGCATGCGCCGGGCACCCCACGTGACGCTGCCGCTGTCGTTCCTGGCCGTGCTGTTCGTGCTGCTGGT
GCTGCTGCGCAGTCCGGGGGACGTGCAGTTCATCCTGCTGCTGCCGCCGATGGCCGTTCTGGCTGCCTTCGCGCTTCCGA
CGCTGCCGCGCGCGGCGATCAACGCGATCGACTGGTTCTCGCTACTGTTCTTCACGATTCTGGGCGGCACGATCTGGTTC
CTCTGGGTCGCGAAGACGACAGGTTGGCCGCCACGCATCGCCAGCAACGTATTCCGTCAGTTGCCCGGATTCCAGCATAC
GTTCACGATCAGCGCCGTCATCATCGCGCTGGCGGTGACGGTGGCATGGGTGCTGATCGTGCGCTGGCGCCTGTCGCGCG
CGCCGAAACAGATCTGGCGACCTGTGGTCATTTCTGCCGCCGGCACGACGCTGATGTGGGTCATGGCGATGACGCTGTGG
CTGCCTTCCATCAACTACGGCAAGACCTATCGAGACGTGGCACAGGCCGCCCAACTGGCGCTGCCGTCCACCTATACCTG
CGTGCAGCCCATCCGCATGGGCGATGCGCAGCTTGCCTCGTTTGCCTATTTCGGTCATATCCGTTTCGGCGGCCCCGATG
ACGGCTGCGACATACTGCTGCGGCATGATGCCGTGGACTACGGCGCCCCGAGCAGCATCTCCCATTTCGAATGGCGCCTG
ATCTGGGAAGGTCGCCGACCCGCCGACCGTGACGAGCGCTTCCGCATGTACCGGCTCGTCGATCTGTCGCACACCGCCCC
GCCACGGCCGACAATTCAGCGCCGGCTGCCGCGTCAGCCCTGA

Upstream 100 bases:

>100_bases
GGACAGATGCTCCCGCGGCGCGCGACCTGACAAAGAGGCAGCATCGGCTGCCTCTTTGCATTTGTGCCCCCACAAGACGA
TTTTCATGCGCCGGGGTCAC

Downstream 100 bases:

>100_bases
GCATCCGCCGCCCGGTAGCGTCCGGACGGCGTTGCCACCCGCTGGCACGCAGCCGGCCCCTACCCTAGAAGAACGATGAG
CAGCGCGCTGCAGGATATTC

Product: 4-Amino-4-deoxy-L-arabinose transferase-like protein

Products: NA

Alternate protein names: Glycosyltransferase; Transmembrane Protein; Glycosyl Transferase Family Protein; Inner Membrane Protein; 4-Amino-4-Deoxy-L-Arabinose Transferase; Glycosyl Transferase Family; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MPYHLPMSQAKTSPVHLTAAATGALPRALLLAICIIYGLAGLFGRDPWKNEDAAGFGVMWQLGSGGLQDWLMPNIVGRPY
SDDGPLVFWIGGGMIRLLGGWLGAPDAARLATALFYFATCALIWYSTYLLGRRDEVQPFAFAFGGQPDARSYGRALADGA
LLIFLACVGLALRGHETTAQVGQVCFIAFTLYGLVRSLDKPVQGSLWFGVGLGALCLASGPILPLVLLAATLIAGLICRP
LPLMRLLTIGAPLGVLIIAVWMATVYFGATVTDDAVTYIREWARYDRHTYGPPSLAAAGFIARNFFLFSWPVWPIAAFAW
LSWRGMRRAPHVTLPLSFLAVLFVLLVLLRSPGDVQFILLLPPMAVLAAFALPTLPRAAINAIDWFSLLFFTILGGTIWF
LWVAKTTGWPPRIASNVFRQLPGFQHTFTISAVIIALAVTVAWVLIVRWRLSRAPKQIWRPVVISAAGTTLMWVMAMTLW
LPSINYGKTYRDVAQAAQLALPSTYTCVQPIRMGDAQLASFAYFGHIRFGGPDDGCDILLRHDAVDYGAPSSISHFEWRL
IWEGRRPADRDERFRMYRLVDLSHTAPPRPTIQRRLPRQP

Sequences:

>Translated_600_residues
MPYHLPMSQAKTSPVHLTAAATGALPRALLLAICIIYGLAGLFGRDPWKNEDAAGFGVMWQLGSGGLQDWLMPNIVGRPY
SDDGPLVFWIGGGMIRLLGGWLGAPDAARLATALFYFATCALIWYSTYLLGRRDEVQPFAFAFGGQPDARSYGRALADGA
LLIFLACVGLALRGHETTAQVGQVCFIAFTLYGLVRSLDKPVQGSLWFGVGLGALCLASGPILPLVLLAATLIAGLICRP
LPLMRLLTIGAPLGVLIIAVWMATVYFGATVTDDAVTYIREWARYDRHTYGPPSLAAAGFIARNFFLFSWPVWPIAAFAW
LSWRGMRRAPHVTLPLSFLAVLFVLLVLLRSPGDVQFILLLPPMAVLAAFALPTLPRAAINAIDWFSLLFFTILGGTIWF
LWVAKTTGWPPRIASNVFRQLPGFQHTFTISAVIIALAVTVAWVLIVRWRLSRAPKQIWRPVVISAAGTTLMWVMAMTLW
LPSINYGKTYRDVAQAAQLALPSTYTCVQPIRMGDAQLASFAYFGHIRFGGPDDGCDILLRHDAVDYGAPSSISHFEWRL
IWEGRRPADRDERFRMYRLVDLSHTAPPRPTIQRRLPRQP
>Mature_599_residues
PYHLPMSQAKTSPVHLTAAATGALPRALLLAICIIYGLAGLFGRDPWKNEDAAGFGVMWQLGSGGLQDWLMPNIVGRPYS
DDGPLVFWIGGGMIRLLGGWLGAPDAARLATALFYFATCALIWYSTYLLGRRDEVQPFAFAFGGQPDARSYGRALADGAL
LIFLACVGLALRGHETTAQVGQVCFIAFTLYGLVRSLDKPVQGSLWFGVGLGALCLASGPILPLVLLAATLIAGLICRPL
PLMRLLTIGAPLGVLIIAVWMATVYFGATVTDDAVTYIREWARYDRHTYGPPSLAAAGFIARNFFLFSWPVWPIAAFAWL
SWRGMRRAPHVTLPLSFLAVLFVLLVLLRSPGDVQFILLLPPMAVLAAFALPTLPRAAINAIDWFSLLFFTILGGTIWFL
WVAKTTGWPPRIASNVFRQLPGFQHTFTISAVIIALAVTVAWVLIVRWRLSRAPKQIWRPVVISAAGTTLMWVMAMTLWL
PSINYGKTYRDVAQAAQLALPSTYTCVQPIRMGDAQLASFAYFGHIRFGGPDDGCDILLRHDAVDYGAPSSISHFEWRLI
WEGRRPADRDERFRMYRLVDLSHTAPPRPTIQRRLPRQP

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66124; Mature: 65992

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYHLPMSQAKTSPVHLTAAATGALPRALLLAICIIYGLAGLFGRDPWKNEDAAGFGVMW
CCCCCCHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
QLGSGGLQDWLMPNIVGRPYSDDGPLVFWIGGGMIRLLGGWLGAPDAARLATALFYFATC
ECCCCCHHHHHCCHHCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALIWYSTYLLGRRDEVQPFAFAFGGQPDARSYGRALADGALLIFLACVGLALRGHETTAQ
HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VGQVCFIAFTLYGLVRSLDKPVQGSLWFGVGLGALCLASGPILPLVLLAATLIAGLICRP
HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
LPLMRLLTIGAPLGVLIIAVWMATVYFGATVTDDAVTYIREWARYDRHTYGPPSLAAAGF
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IARNFFLFSWPVWPIAAFAWLSWRGMRRAPHVTLPLSFLAVLFVLLVLLRSPGDVQFILL
HHHHHHHEECCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCCEEEEEE
LPPMAVLAAFALPTLPRAAINAIDWFSLLFFTILGGTIWFLWVAKTTGWPPRIASNVFRQ
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LPGFQHTFTISAVIIALAVTVAWVLIVRWRLSRAPKQIWRPVVISAAGTTLMWVMAMTLW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHEECCHHHHHHHHHHHHH
LPSINYGKTYRDVAQAAQLALPSTYTCVQPIRMGDAQLASFAYFGHIRFGGPDDGCDILL
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCEEEE
RHDAVDYGAPSSISHFEWRLIWEGRRPADRDERFRMYRLVDLSHTAPPRPTIQRRLPRQP
EECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure 
PYHLPMSQAKTSPVHLTAAATGALPRALLLAICIIYGLAGLFGRDPWKNEDAAGFGVMW
CCCCCHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
QLGSGGLQDWLMPNIVGRPYSDDGPLVFWIGGGMIRLLGGWLGAPDAARLATALFYFATC
ECCCCCHHHHHCCHHCCCCCCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
ALIWYSTYLLGRRDEVQPFAFAFGGQPDARSYGRALADGALLIFLACVGLALRGHETTAQ
HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VGQVCFIAFTLYGLVRSLDKPVQGSLWFGVGLGALCLASGPILPLVLLAATLIAGLICRP
HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
LPLMRLLTIGAPLGVLIIAVWMATVYFGATVTDDAVTYIREWARYDRHTYGPPSLAAAGF
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IARNFFLFSWPVWPIAAFAWLSWRGMRRAPHVTLPLSFLAVLFVLLVLLRSPGDVQFILL
HHHHHHHEECCHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCCEEEEEE
LPPMAVLAAFALPTLPRAAINAIDWFSLLFFTILGGTIWFLWVAKTTGWPPRIASNVFRQ
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LPGFQHTFTISAVIIALAVTVAWVLIVRWRLSRAPKQIWRPVVISAAGTTLMWVMAMTLW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHEECCHHHHHHHHHHHHH
LPSINYGKTYRDVAQAAQLALPSTYTCVQPIRMGDAQLASFAYFGHIRFGGPDDGCDILL
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHEEEEEECCCCCCCEEEE
RHDAVDYGAPSSISHFEWRLIWEGRRPADRDERFRMYRLVDLSHTAPPRPTIQRRLPRQP
EECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHEEECCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA