Click here to switch to the map view.

The map label for this gene is rpmE2

Identifier: 94311075

GI number: 94311075

Start: 2325652

End: 2325912

Strand: Direct

Name: rpmE2

Synonym: Rmet_2137

Alternate gene names: 94311075

Gene position: 2325652-2325912 (Clockwise)

Preceding gene: 94311074

Following gene: 94311076

Centisome position: 59.21

GC content: 57.09

Gene sequence:

>261_bases
ATGAAAGAAGGCATTCACCCGAATTACCGTGAAGTCCTGTTCCACGACGTGTCGAACGACTTCAAGTTCGTGACCCGCTC
GACGATCCAGACCAAGGACACGATCGAACACGAAGGCAAGACCTACCCGCTGGCCAAGATCGAAGTGTCGTCGGAATCGC
ACCCGTTCTACACCGGCACGCAAAAGATCATGGACACGGCCGGCCGCGTCGAGAAGTTCCGCCAGAAGTTCGGCAGCAAG
CTGGGCGCCGCCAAGAAGTAA

Upstream 100 bases:

>100_bases
ATCCCGGTTTGCCCGTTATCGGCAAGTGGTTCGCTCGCCGCAAGCTTTCTGACCTGCGGCACGACGAGCGGACTGGCTAC
CCAACCTGAAAGGAAGCACC

Downstream 100 bases:

>100_bases
TTGCCCCGCTTTATGCGAGCAAGCGCCGCGCCCAGAGGACAGATGCTCCCGCGGCGCGCGACCTGACAAAGAGGCAGCAT
CGGCTGCCTCTTTGCATTTG

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKEGIHPNYREVLFHDVSNDFKFVTRSTIQTKDTIEHEGKTYPLAKIEVSSESHPFYTGTQKIMDTAGRVEKFRQKFGSK
LGAAKK

Sequences:

>Translated_86_residues
MKEGIHPNYREVLFHDVSNDFKFVTRSTIQTKDTIEHEGKTYPLAKIEVSSESHPFYTGTQKIMDTAGRVEKFRQKFGSK
LGAAKK
>Mature_86_residues
MKEGIHPNYREVLFHDVSNDFKFVTRSTIQTKDTIEHEGKTYPLAKIEVSSESHPFYTGTQKIMDTAGRVEKFRQKFGSK
LGAAKK

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=78, Percent_Identity=52.5641025641026, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_RALME (Q1LLG0)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_584285.1
- ProteinModelPortal:   Q1LLG0
- SMR:   Q1LLG0
- STRING:   Q1LLG0
- GeneID:   4038946
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_2137
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- PhylomeDB:   Q1LLG0
- BioCyc:   RMET266264:RMET_2137-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9863; Mature: 9863

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGIHPNYREVLFHDVSNDFKFVTRSTIQTKDTIEHEGKTYPLAKIEVSSESHPFYTGT
CCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCH
QKIMDTAGRVEKFRQKFGSKLGAAKK
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKEGIHPNYREVLFHDVSNDFKFVTRSTIQTKDTIEHEGKTYPLAKIEVSSESHPFYTGT
CCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCH
QKIMDTAGRVEKFRQKFGSKLGAAKK
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA