| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yfgM [C]
Identifier: 94311042
GI number: 94311042
Start: 2285556
End: 2286188
Strand: Reverse
Name: yfgM [C]
Synonym: Rmet_2104
Alternate gene names: 94311042
Gene position: 2286188-2285556 (Counterclockwise)
Preceding gene: 94311043
Following gene: 94311041
Centisome position: 58.2
GC content: 64.14
Gene sequence:
>633_bases ATGGCTTACGATCTAGAAGAACAGGAACAGCTTGAGAGTCTCAAGGCCTGGTGGAAACAGTATGGCAACGCTGTCACCTG GGCGTTGATTGTCATCTTGCTCGGGTTGGCTGCCTGGAGTGGTTGGGGTTACTGGCAGCGCGTGCAGGCGCGCGATGCGT CGCTGCTGTATGAGCAGGTCACCAAGGCTGCGGAAAGCCGCGACGCCGACCGCGTGAAGCGCGCCGCTACCGACCTCGAA GAGAAGTTTGGTCGTACCGCCTATGGACCGATGAGCGCGTTGGTCGCGGCCAAGGTGCTGTACGAAGCCGGTGATCTGGC TGGCGCCAAGACCCAGCTCCAGTGGGCAATCGACCATGGCGGTGACGACTACGCGCCGCTGGCCCGTGTGCGCATGGCTG GCGTGCTGCTGGACGAGAAGGCCTATGACCAGGGTCTGGCGCTGCTCAAGGACGAGCCGGCCGCACCTTACGCTGCGCTG TTCGCAGACCGTCGTGGCGATCTGCTGGCCGCCCAGGACAAGCGCGAGGAAGCGCGTACCGCCTATCGCAGCGCGCTCGA CAAGCTCGGCAGCGGTGAGGCGGCCATGCGCCAGATCATCCAGTTCAAACTCGATGCGCTGGGCGCGGCCTGA
Upstream 100 bases:
>100_bases GCGACGACGAGCAATAATCTGCCGTTCCCTATCGCAGCACCCGGTCGTTGTCCCTGACGGCGGCCGGTTATATTCAACCT AAGCAGATAACTGCCTCGAC
Downstream 100 bases:
>100_bases GCGGCCCCAGTTCCTTACTAAGGATTGCACCGTATGACGTCATTGCTTCGCGTAGCCGCCACCCGCACGATCGTTGCCGG CACCTGTCTCGGCCTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MAYDLEEQEQLESLKAWWKQYGNAVTWALIVILLGLAAWSGWGYWQRVQARDASLLYEQVTKAAESRDADRVKRAATDLE EKFGRTAYGPMSALVAAKVLYEAGDLAGAKTQLQWAIDHGGDDYAPLARVRMAGVLLDEKAYDQGLALLKDEPAAPYAAL FADRRGDLLAAQDKREEARTAYRSALDKLGSGEAAMRQIIQFKLDALGAA
Sequences:
>Translated_210_residues MAYDLEEQEQLESLKAWWKQYGNAVTWALIVILLGLAAWSGWGYWQRVQARDASLLYEQVTKAAESRDADRVKRAATDLE EKFGRTAYGPMSALVAAKVLYEAGDLAGAKTQLQWAIDHGGDDYAPLARVRMAGVLLDEKAYDQGLALLKDEPAAPYAAL FADRRGDLLAAQDKREEARTAYRSALDKLGSGEAAMRQIIQFKLDALGAA >Mature_209_residues AYDLEEQEQLESLKAWWKQYGNAVTWALIVILLGLAAWSGWGYWQRVQARDASLLYEQVTKAAESRDADRVKRAATDLEE KFGRTAYGPMSALVAAKVLYEAGDLAGAKTQLQWAIDHGGDDYAPLARVRMAGVLLDEKAYDQGLALLKDEPAAPYAALF ADRRGDLLAAQDKREEARTAYRSALDKLGSGEAAMRQIIQFKLDALGAA
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TPR repeat [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=209, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 23142; Mature: 23011
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDLEEQEQLESLKAWWKQYGNAVTWALIVILLGLAAWSGWGYWQRVQARDASLLYEQV CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TKAAESRDADRVKRAATDLEEKFGRTAYGPMSALVAAKVLYEAGDLAGAKTQLQWAIDHG HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEECCC GDDYAPLARVRMAGVLLDEKAYDQGLALLKDEPAAPYAALFADRRGDLLAAQDKREEART CCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHCCCCEECCHHHHHHHHH AYRSALDKLGSGEAAMRQIIQFKLDALGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AYDLEEQEQLESLKAWWKQYGNAVTWALIVILLGLAAWSGWGYWQRVQARDASLLYEQV CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH TKAAESRDADRVKRAATDLEEKFGRTAYGPMSALVAAKVLYEAGDLAGAKTQLQWAIDHG HHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEECCC GDDYAPLARVRMAGVLLDEKAYDQGLALLKDEPAAPYAALFADRRGDLLAAQDKREEART CCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHHHCCCCEECCHHHHHHHHH AYRSALDKLGSGEAAMRQIIQFKLDALGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10655208 [H]