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The map label for this gene is ccoN [H]

Identifier: 94310982

GI number: 94310982

Start: 2210881

End: 2212329

Strand: Reverse

Name: ccoN [H]

Synonym: Rmet_2044

Alternate gene names: 94310982

Gene position: 2212329-2210881 (Counterclockwise)

Preceding gene: 94310983

Following gene: 94310981

Centisome position: 56.32

GC content: 59.77

Gene sequence:

>1449_bases
ATGGCTGTCACCACCGCGTCCTCACGCGCCGACACCTTCAACTATGGAGTCGTGCGGCAGTTTGCCGTCATGACCGTGGT
TTGGGGGATCGTTGGCATGGCCGTAGGCGTTCTGCTTGCGGCGCAATTGATCTGGCCGGATCTGAATTTCAATACACCGT
GGTTATCGTTCGGTCGCTTGCGACCGCTTCACACCAATGCGGTGATCTTTGCATTTGGCGGTAGCGCGCTGTTCGCCACG
TCGTACTACGTCGTGCAACGCACCTGCCAGGCCCGGCTGTTCTGCGGCCCGCTGGCGTCGTTCACATTCTGGGGCTGGCA
AGCCATCATCATCGCGGCGGTGATCACGCTGCCGATGGGCATTACTTCTTCCAAGGAGTATGCCGAGCTCGAATGGCCGA
TCGATATCCTGATCACGCTGGTCTGGGTTGCCTACGCGGTGGTGTTCTTCGGCACGATCATCAAGCGCAAGACCCGCCAT
ATCTACGTGGCGAACTGGTTCTTCGGCGCTTACATCCTGACGATCGCCATCCTCCATATCGTCAACAACATCGAAATGCC
GGTGTCGATGTGGAAGTCGTACTCCGCCTATGCAGGCGTGCAGGACGCGATGATCCAGTGGTGGTACGGCCACAACGCGG
TGGGCTTCTTCCTGACCACGAGCTTCCTGGGGATGATGTACTACTTCATCCCGAAGCAGGCAGAGCGTCCGATCTACTCG
TATCGCCTGTCGATCGTCCACTTCTGGGCGCTCAACTTCACGTACATGTGGGCGGGTCCGCACCACCTGCAGTACACCTC
GCTGCCTGACTGGGCGCAGTCGCTGGGCATGGTGTTCTCGCTGATCCTGCTGGCTCCGTCGTGGGGCGGCATGATCAACG
GGATCATGACGCTGTCCGGTGCCTGGCACAAGCTGCGTACCGATCCGATTCTCAAGTTCCTGGTGGTGGCGCTGTCGTTC
TACGGCATGGCCACGTTCGAGGGCTCGATGATGTCGATCAAGACGGTGAACGCGCTGTCGCACTACACGGACTGGACGAT
CGGCCACGTGCACTCGGGTGCCCTGGGCTGGGTCGCGATGATCTCGATTGGCTCGCTTTACTACCTGATTCCGCGCCTGT
TCGGGGAGAAGGAGATGTACAGCACGCGCCTGATCGAGTGGCACTTCTGGATTGCGACGATCGGCGTCGTGCTCTACATC
GCCTCGATGTGGATCGCCGGTGTGATGGAAGGTCTGATGTGGCGCGCCACGCAGCCTGACGGCACGCTGACCTATGCGTT
CGTCGAAGCGGTCAAGGCAAAGTATCCGTTCTATCTGATCCGTCTGCTGGGTGGCCTGTGCTTCCTGAGCGGCATGATCC
TCATGGCTTACAACGTGGCACGTACCATCATTGGCAAGCCTGCGGTTGACGCTCCGATTCCGGCCAACCTGCCGGCTTCC
GCCCACTGA

Upstream 100 bases:

>100_bases
GATGCTGGTGGCTTGATGAAAGTCAACGCGACTTGTAAGCCGATTTTCTAAAGTCACACCGTCAGTAGGTTTATTTTTAC
TTTTTGCATTGGGGGTCTGA

Downstream 100 bases:

>100_bases
TCGCCGAGGACCGAACGATGTCTCAAAAACAAGGATTCTTTTCCCACGAAACGCTGGAGAAGAACGTCGGCTGGCTGATC
ATCGCAACCATCATCGTGGT

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MAVTTASSRADTFNYGVVRQFAVMTVVWGIVGMAVGVLLAAQLIWPDLNFNTPWLSFGRLRPLHTNAVIFAFGGSALFAT
SYYVVQRTCQARLFCGPLASFTFWGWQAIIIAAVITLPMGITSSKEYAELEWPIDILITLVWVAYAVVFFGTIIKRKTRH
IYVANWFFGAYILTIAILHIVNNIEMPVSMWKSYSAYAGVQDAMIQWWYGHNAVGFFLTTSFLGMMYYFIPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTSLPDWAQSLGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAMISIGSLYYLIPRLFGEKEMYSTRLIEWHFWIATIGVVLYI
ASMWIAGVMEGLMWRATQPDGTLTYAFVEAVKAKYPFYLIRLLGGLCFLSGMILMAYNVARTIIGKPAVDAPIPANLPAS
AH

Sequences:

>Translated_482_residues
MAVTTASSRADTFNYGVVRQFAVMTVVWGIVGMAVGVLLAAQLIWPDLNFNTPWLSFGRLRPLHTNAVIFAFGGSALFAT
SYYVVQRTCQARLFCGPLASFTFWGWQAIIIAAVITLPMGITSSKEYAELEWPIDILITLVWVAYAVVFFGTIIKRKTRH
IYVANWFFGAYILTIAILHIVNNIEMPVSMWKSYSAYAGVQDAMIQWWYGHNAVGFFLTTSFLGMMYYFIPKQAERPIYS
YRLSIVHFWALNFTYMWAGPHHLQYTSLPDWAQSLGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLVVALSF
YGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAMISIGSLYYLIPRLFGEKEMYSTRLIEWHFWIATIGVVLYI
ASMWIAGVMEGLMWRATQPDGTLTYAFVEAVKAKYPFYLIRLLGGLCFLSGMILMAYNVARTIIGKPAVDAPIPANLPAS
AH
>Mature_481_residues
AVTTASSRADTFNYGVVRQFAVMTVVWGIVGMAVGVLLAAQLIWPDLNFNTPWLSFGRLRPLHTNAVIFAFGGSALFATS
YYVVQRTCQARLFCGPLASFTFWGWQAIIIAAVITLPMGITSSKEYAELEWPIDILITLVWVAYAVVFFGTIIKRKTRHI
YVANWFFGAYILTIAILHIVNNIEMPVSMWKSYSAYAGVQDAMIQWWYGHNAVGFFLTTSFLGMMYYFIPKQAERPIYSY
RLSIVHFWALNFTYMWAGPHHLQYTSLPDWAQSLGMVFSLILLAPSWGGMINGIMTLSGAWHKLRTDPILKFLVVALSFY
GMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAMISIGSLYYLIPRLFGEKEMYSTRLIEWHFWIATIGVVLYIA
SMWIAGVMEGLMWRATQPDGTLTYAFVEAVKAKYPFYLIRLLGGLCFLSGMILMAYNVARTIIGKPAVDAPIPANLPASA
H

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 54186; Mature: 54055

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTTASSRADTFNYGVVRQFAVMTVVWGIVGMAVGVLLAAQLIWPDLNFNTPWLSFGRL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RPLHTNAVIFAFGGSALFATSYYVVQRTCQARLFCGPLASFTFWGWQAIIIAAVITLPMG
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
ITSSKEYAELEWPIDILITLVWVAYAVVFFGTIIKRKTRHIYVANWFFGAYILTIAILHI
CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
VNNIEMPVSMWKSYSAYAGVQDAMIQWWYGHNAVGFFLTTSFLGMMYYFIPKQAERPIYS
HHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIVHFWALNFTYMWAGPHHLQYTSLPDWAQSLGMVFSLILLAPSWGGMINGIMTLSG
HHHHHHHEEECCEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AWHKLRTDPILKFLVVALSFYGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAM
CHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHCCCCHHCCCCCHHHHHHH
ISIGSLYYLIPRLFGEKEMYSTRLIEWHFWIATIGVVLYIASMWIAGVMEGLMWRATQPD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GTLTYAFVEAVKAKYPFYLIRLLGGLCFLSGMILMAYNVARTIIGKPAVDAPIPANLPAS
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AH
CC
>Mature Secondary Structure 
AVTTASSRADTFNYGVVRQFAVMTVVWGIVGMAVGVLLAAQLIWPDLNFNTPWLSFGRL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RPLHTNAVIFAFGGSALFATSYYVVQRTCQARLFCGPLASFTFWGWQAIIIAAVITLPMG
CEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCC
ITSSKEYAELEWPIDILITLVWVAYAVVFFGTIIKRKTRHIYVANWFFGAYILTIAILHI
CCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHH
VNNIEMPVSMWKSYSAYAGVQDAMIQWWYGHNAVGFFLTTSFLGMMYYFIPKQAERPIYS
HHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
YRLSIVHFWALNFTYMWAGPHHLQYTSLPDWAQSLGMVFSLILLAPSWGGMINGIMTLSG
HHHHHHHEEECCEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
AWHKLRTDPILKFLVVALSFYGMATFEGSMMSIKTVNALSHYTDWTIGHVHSGALGWVAM
CHHHHCCCHHHHHHHHHHHHHHHHEECCCEEEEHHHHHHHHHCCCCHHCCCCCHHHHHHH
ISIGSLYYLIPRLFGEKEMYSTRLIEWHFWIATIGVVLYIASMWIAGVMEGLMWRATQPD
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
GTLTYAFVEAVKAKYPFYLIRLLGGLCFLSGMILMAYNVARTIIGKPAVDAPIPANLPAS
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]