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The map label for this gene is ccoO

Identifier: 94310981

GI number: 94310981

Start: 2210198

End: 2210863

Strand: Reverse

Name: ccoO

Synonym: Rmet_2043

Alternate gene names: NA

Gene position: 2210863-2210198 (Counterclockwise)

Preceding gene: 94310982

Following gene: 94310980

Centisome position: 56.28

GC content: 62.46

Gene sequence:

>666_bases
ATGTCTCAAAAACAAGGATTCTTTTCCCACGAAACGCTGGAGAAGAACGTCGGCTGGCTGATCATCGCAACCATCATCGT
GGTCAGTATCGCTGGCCTGGTGCAGATCGTGCCGCTGTTCTTCCAGCACTCGACGACTGAGCCCGATCCGGGCATCACGC
CGTACTCGCCGCTGCGCCTGATGGGGCGCGACATCTACATCCGTGAGGGTTGCGTTGGTTGCCACTCGCAGCAGGTGCGT
ACCCTGCAGGCGGAGACTGAGCGTTATGGCCATTTCTCCACGGCGGGCGAGTCGGTGTATGACCACCCGTTCCTGTGGGG
CTCGAAGCGTACCGGTCCGGATCTCGCGCGCGTTGGCGGCCGTTACTCGGACGACTGGCAGCGGATCCACCTGCGCAATC
CGCGCGATGTGGTTCCCGAGTCGGTGATGCCTTCGTACCCGTGGCTGGAGAAGACGCAGTTGCCCACCAACGACATCCAG
GCACGCATGCACGCGCTGAAGCGTCTGGGTGTGCCGTACAAGGACGAAGAGATTGCCCGTGCGCCTGAAGAGTTGGCGGG
CAAGACGGAAGAAGATGCGCTGGTGGCGTATCTGCAGGGACTTGGCCTGAATCGCCGCAATGTGCGCGTTGACTCGGCGG
CGGCTCCGGCGCCGGCGAAGGAGTGA

Upstream 100 bases:

>100_bases
CTTACAACGTGGCACGTACCATCATTGGCAAGCCTGCGGTTGACGCTCCGATTCCGGCCAACCTGCCGGCTTCCGCCCAC
TGATCGCCGAGGACCGAACG

Downstream 100 bases:

>100_bases
TGCCATGGCGATCGTGACCGCAATTGCAACCGTCGTGTCGATGCTGACGTTCATTGGCATCTGCTGGTGGGCATGGTCGG
GCGGCCGCCAGGCCGCCAAT

Product: cbb3-type cytochrome c oxidase subunit II

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cb-Type Cytochrome C Oxidase Subunit II; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome-C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Transmembrane Cytochrome C Oxidase FixO Protein; Cytochrome-Cbb3 Oxidase Subunit I; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome Oxidase; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome C Oxidase Family Protein; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome-Cbb3 Oxidase Subunit II; Cytochrome C Family Protein; Cytochrome C Oxidase CcoO Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSQKQGFFSHETLEKNVGWLIIATIIVVSIAGLVQIVPLFFQHSTTEPDPGITPYSPLRLMGRDIYIREGCVGCHSQQVR
TLQAETERYGHFSTAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWQRIHLRNPRDVVPESVMPSYPWLEKTQLPTNDIQ
ARMHALKRLGVPYKDEEIARAPEELAGKTEEDALVAYLQGLGLNRRNVRVDSAAAPAPAKE

Sequences:

>Translated_221_residues
MSQKQGFFSHETLEKNVGWLIIATIIVVSIAGLVQIVPLFFQHSTTEPDPGITPYSPLRLMGRDIYIREGCVGCHSQQVR
TLQAETERYGHFSTAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWQRIHLRNPRDVVPESVMPSYPWLEKTQLPTNDIQ
ARMHALKRLGVPYKDEEIARAPEELAGKTEEDALVAYLQGLGLNRRNVRVDSAAAPAPAKE
>Mature_220_residues
SQKQGFFSHETLEKNVGWLIIATIIVVSIAGLVQIVPLFFQHSTTEPDPGITPYSPLRLMGRDIYIREGCVGCHSQQVRT
LQAETERYGHFSTAGESVYDHPFLWGSKRTGPDLARVGGRYSDDWQRIHLRNPRDVVPESVMPSYPWLEKTQLPTNDIQA
RMHALKRLGVPYKDEEIARAPEELAGKTEEDALVAYLQGLGLNRRNVRVDSAAAPAPAKE

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 24806; Mature: 24675

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKQGFFSHETLEKNVGWLIIATIIVVSIAGLVQIVPLFFQHSTTEPDPGITPYSPLRL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
MGRDIYIREGCVGCHSQQVRTLQAETERYGHFSTAGESVYDHPFLWGSKRTGPDLARVGG
HCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHCC
RYSDDWQRIHLRNPRDVVPESVMPSYPWLEKTQLPTNDIQARMHALKRLGVPYKDEEIAR
CCCCCHHEEECCCCHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHC
APEELAGKTEEDALVAYLQGLGLNRRNVRVDSAAAPAPAKE
CCHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SQKQGFFSHETLEKNVGWLIIATIIVVSIAGLVQIVPLFFQHSTTEPDPGITPYSPLRL
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
MGRDIYIREGCVGCHSQQVRTLQAETERYGHFSTAGESVYDHPFLWGSKRTGPDLARVGG
HCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHCC
RYSDDWQRIHLRNPRDVVPESVMPSYPWLEKTQLPTNDIQARMHALKRLGVPYKDEEIAR
CCCCCHHEEECCCCHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHC
APEELAGKTEEDALVAYLQGLGLNRRNVRVDSAAAPAPAKE
CCHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA