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The map label for this gene is crtB [H]

Identifier: 94310882

GI number: 94310882

Start: 2114598

End: 2115428

Strand: Direct

Name: crtB [H]

Synonym: Rmet_1944

Alternate gene names: 94310882

Gene position: 2114598-2115428 (Clockwise)

Preceding gene: 94310879

Following gene: 94310883

Centisome position: 53.83

GC content: 65.58

Gene sequence:

>831_bases
GTGACGCCCGATCAGTATTGCCAGGACAAGGCCGCCCAGAGCGGCTCCAGCTTCTACTACAGTAGCCTGCTTCTCCCCTC
CGACCGCCGCAACGCCCTGACCGCGCTGCAAGCCTGGCGCCAGGAACTCGATGCCATCGTCAACGAGAACCATGACGCCG
GCGTAGCCCATCAGCGCCTGGACTGGTGGCGCGCGGAATTGCGCCGCCTGTACGACGGGGGGGCAGCCCACCCGGTCAGC
CAGGCGCTGCAGCCGCATCTGGATGCGCTGCCGCAGGCCGAAATGGCCGAGATGCTCGCCGCCACCGAGATGGATTTGGC
GCAATCGCGCTATCTGGACGAGATCGGCCTGCTTCGATACTGCCGCGCCTCGGGCGGCACGTTCGGCAAGCTGACGGCCC
GCGTGCTTGGCCACACCGACCCACGCACGCTCGACGCCGCGGAACAGCTTGGGCTGTCCTTGCAGCGGGTGCGCATTGTG
AAGGATATCGGTGGCGATGCGCGCCACGGCCGCATTTATATTCCCGTCGATACGCTGCAACGCTTGGAAGTGCCCGCCGC
GGACATCCTCCAGTCGCGCCATTCGGACCGCTTTGTCGCGCTGATGCGGGAACAGGCCACGCAAGCCCGCGCGCTGTATG
GCGAGGCACTGGCCGCACTGCCACGCGCCGATCGTCGGTCTCAGCGTGCCCAGCTGGCCTTCGCGGCCATTCAGCACGCT
CTTCTGGACGAAATCGAAGCCAGCGACTTCCAGGTCCTGAACCAGCGCATCGATCTGACGCCGATGCGCAAGCTCTGGAT
TGCCTGGAAAACCTGGCTGAAGAATGGCTAA

Upstream 100 bases:

>100_bases
CGAGCGTCAGCGGGCGCCTGAAGGCGCCGGCGGCTTCGCCCGGTGCTACAATCCGCGCCTTTGGCGCCGCCCCCGCCGCC
CCACATTCAAAGAGATTGGC

Downstream 100 bases:

>100_bases
CCCCCGGCTTCGTTCTGCTTTTCTGCCTTTCTGCTTTCTGCCCTACTGTCGTTGACGCCATGACCATCGCCACCCCTTCC
CTCGGCCAGTCGATCCTCGA

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTPDQYCQDKAAQSGSSFYYSSLLLPSDRRNALTALQAWRQELDAIVNENHDAGVAHQRLDWWRAELRRLYDGGAAHPVS
QALQPHLDALPQAEMAEMLAATEMDLAQSRYLDEIGLLRYCRASGGTFGKLTARVLGHTDPRTLDAAEQLGLSLQRVRIV
KDIGGDARHGRIYIPVDTLQRLEVPAADILQSRHSDRFVALMREQATQARALYGEALAALPRADRRSQRAQLAFAAIQHA
LLDEIEASDFQVLNQRIDLTPMRKLWIAWKTWLKNG

Sequences:

>Translated_276_residues
MTPDQYCQDKAAQSGSSFYYSSLLLPSDRRNALTALQAWRQELDAIVNENHDAGVAHQRLDWWRAELRRLYDGGAAHPVS
QALQPHLDALPQAEMAEMLAATEMDLAQSRYLDEIGLLRYCRASGGTFGKLTARVLGHTDPRTLDAAEQLGLSLQRVRIV
KDIGGDARHGRIYIPVDTLQRLEVPAADILQSRHSDRFVALMREQATQARALYGEALAALPRADRRSQRAQLAFAAIQHA
LLDEIEASDFQVLNQRIDLTPMRKLWIAWKTWLKNG
>Mature_275_residues
TPDQYCQDKAAQSGSSFYYSSLLLPSDRRNALTALQAWRQELDAIVNENHDAGVAHQRLDWWRAELRRLYDGGAAHPVSQ
ALQPHLDALPQAEMAEMLAATEMDLAQSRYLDEIGLLRYCRASGGTFGKLTARVLGHTDPRTLDAAEQLGLSLQRVRIVK
DIGGDARHGRIYIPVDTLQRLEVPAADILQSRHSDRFVALMREQATQARALYGEALAALPRADRRSQRAQLAFAAIQHAL
LDEIEASDFQVLNQRIDLTPMRKLWIAWKTWLKNG

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 31035; Mature: 30903

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDQYCQDKAAQSGSSFYYSSLLLPSDRRNALTALQAWRQELDAIVNENHDAGVAHQRL
CCCHHHHHHHHHCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
DWWRAELRRLYDGGAAHPVSQALQPHLDALPQAEMAEMLAATEMDLAQSRYLDEIGLLRY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRASGGTFGKLTARVLGHTDPRTLDAAEQLGLSLQRVRIVKDIGGDARHGRIYIPVDTLQ
HHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEHHHHH
RLEVPAADILQSRHSDRFVALMREQATQARALYGEALAALPRADRRSQRAQLAFAAIQHA
HHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLDEIEASDFQVLNQRIDLTPMRKLWIAWKTWLKNG
HHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPDQYCQDKAAQSGSSFYYSSLLLPSDRRNALTALQAWRQELDAIVNENHDAGVAHQRL
CCHHHHHHHHHCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
DWWRAELRRLYDGGAAHPVSQALQPHLDALPQAEMAEMLAATEMDLAQSRYLDEIGLLRY
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CRASGGTFGKLTARVLGHTDPRTLDAAEQLGLSLQRVRIVKDIGGDARHGRIYIPVDTLQ
HHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEHHHHH
RLEVPAADILQSRHSDRFVALMREQATQARALYGEALAALPRADRRSQRAQLAFAAIQHA
HHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LLDEIEASDFQVLNQRIDLTPMRKLWIAWKTWLKNG
HHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA