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The map label for this gene is ntaR [H]

Identifier: 94310867

GI number: 94310867

Start: 2097132

End: 2097881

Strand: Reverse

Name: ntaR [H]

Synonym: Rmet_1929

Alternate gene names: 94310867

Gene position: 2097881-2097132 (Counterclockwise)

Preceding gene: 94310869

Following gene: 94310866

Centisome position: 53.41

GC content: 63.87

Gene sequence:

>750_bases
GTGAAATATCACACTAGTATCACTGCAACATCAAACAGATTCCGATCTGCCGTGGCGAATCCCATCCGACTGGTCGGCGC
AGCCGACGCCGAACCCACAATCCCGACCCCCGCCCAGAGCGGCGCGGCCATGCGCGAACACGCATACACCGAGATCAAGC
GTCGCATCATCTCGTGCGAGTTCCGGCCCGGCGAGCCGCTGAACGAGGCCCAGGTGGCCGCGTTGCTCGGTCTTGGTCGT
ACCCCCGTGCATCAGGCGCTGCATCGCCTGGAGGTGGAAGGGCTGGTATCGATCCTGCCGCGCAAGGGCGTGCTGGTGAC
GCCGCTGTCGCTCAATGAAGTGCTCGACATGATCGAAGTGCGCGCGACCAATGAGGTGCTGTGCGCCACCCTGGCCTGCG
AACGCGGTCACGACAGCGATTTCAAGGCGATGCGCGACATCGTCGACCGCTCGCCCGAGTTGATCGCCAGGCGCGATATC
CCAGCGCTGGCCGCTCTGGACCTGAAGTTCCACACGGCGATGTCGGCCGCCTCGCGCAACCGCGTGCTGGCCGATCTGCT
GCGTGGCCTGCACGAGAAGCAGGCGCGTTTCTGGTTCCTCTCACTGTCGGATCCGCAGCACCTGGAGAACGTATACCAGG
AGCATCTGGAGATCGTCAACGCCCTGGAGCGGCGCGACGTGCCGGCGGTGCGCGAGGCCATCCGCGAACATATCGACGAA
TTCCGGAAGAACATCATCCGGACACTCTGA

Upstream 100 bases:

>100_bases
AATCGATTATCGATTTCAGACCGATTGCCCATGATACGTGAGCCGGCCTATTTGCGAAGCTGCTTGGTGTTTACCCCTAC
AATTTCTCGGGTTGTGCTCA

Downstream 100 bases:

>100_bases
CCGACCCTTTTCCCCTCGTAACAAGGTAGTACGCAATGCCGACACTGCATCTTCAGGTAGCCGGCGGGGGCGCGCTCGCC
CTCGACATCGAACGATTGAT

Product: regulatory protein GntR, HTH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKYHTSITATSNRFRSAVANPIRLVGAADAEPTIPTPAQSGAAMREHAYTEIKRRIISCEFRPGEPLNEAQVAALLGLGR
TPVHQALHRLEVEGLVSILPRKGVLVTPLSLNEVLDMIEVRATNEVLCATLACERGHDSDFKAMRDIVDRSPELIARRDI
PALAALDLKFHTAMSAASRNRVLADLLRGLHEKQARFWFLSLSDPQHLENVYQEHLEIVNALERRDVPAVREAIREHIDE
FRKNIIRTL

Sequences:

>Translated_249_residues
MKYHTSITATSNRFRSAVANPIRLVGAADAEPTIPTPAQSGAAMREHAYTEIKRRIISCEFRPGEPLNEAQVAALLGLGR
TPVHQALHRLEVEGLVSILPRKGVLVTPLSLNEVLDMIEVRATNEVLCATLACERGHDSDFKAMRDIVDRSPELIARRDI
PALAALDLKFHTAMSAASRNRVLADLLRGLHEKQARFWFLSLSDPQHLENVYQEHLEIVNALERRDVPAVREAIREHIDE
FRKNIIRTL
>Mature_249_residues
MKYHTSITATSNRFRSAVANPIRLVGAADAEPTIPTPAQSGAAMREHAYTEIKRRIISCEFRPGEPLNEAQVAALLGLGR
TPVHQALHRLEVEGLVSILPRKGVLVTPLSLNEVLDMIEVRATNEVLCATLACERGHDSDFKAMRDIVDRSPELIARRDI
PALAALDLKFHTAMSAASRNRVLADLLRGLHEKQARFWFLSLSDPQHLENVYQEHLEIVNALERRDVPAVREAIREHIDE
FRKNIIRTL

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=213, Percent_Identity=24.8826291079812, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082149, Length=204, Percent_Identity=28.4313725490196, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 27939; Mature: 27939

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYHTSITATSNRFRSAVANPIRLVGAADAEPTIPTPAQSGAAMREHAYTEIKRRIISCE
CCEECEEEHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
FRPGEPLNEAQVAALLGLGRTPVHQALHRLEVEGLVSILPRKGVLVTPLSLNEVLDMIEV
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
RATNEVLCATLACERGHDSDFKAMRDIVDRSPELIARRDIPALAALDLKFHTAMSAASRN
HCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RVLADLLRGLHEKQARFWFLSLSDPQHLENVYQEHLEIVNALERRDVPAVREAIREHIDE
HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FRKNIIRTL
HHHHHHHCC
>Mature Secondary Structure
MKYHTSITATSNRFRSAVANPIRLVGAADAEPTIPTPAQSGAAMREHAYTEIKRRIISCE
CCEECEEEHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
FRPGEPLNEAQVAALLGLGRTPVHQALHRLEVEGLVSILPRKGVLVTPLSLNEVLDMIEV
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
RATNEVLCATLACERGHDSDFKAMRDIVDRSPELIARRDIPALAALDLKFHTAMSAASRN
HCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RVLADLLRGLHEKQARFWFLSLSDPQHLENVYQEHLEIVNALERRDVPAVREAIREHIDE
HHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FRKNIIRTL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA