| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is fabG [H]
Identifier: 94310862
GI number: 94310862
Start: 2091301
End: 2092017
Strand: Direct
Name: fabG [H]
Synonym: Rmet_1924
Alternate gene names: 94310862
Gene position: 2091301-2092017 (Clockwise)
Preceding gene: 94310855
Following gene: 94310868
Centisome position: 53.24
GC content: 58.02
Gene sequence:
>717_bases ATGGCGGAGCGGCGAACAGCTCTTGTAACTGGCGCAACGAAGGGGATTGGACTGGCCTTGAGCAAGCATTTGCAGCAACT TGGCTGGAGCGTTATCGGCGTTGCCCGCCATGCAATTGAGGGCTTTCCCGGTCAGCTTCTTACAGCTGATTTGGCGGACA TCCAGCAAACCGACGCAGTACTGGCCCAAGTCGTGGCGGCATCAAGGATTGATGCGGTGATCAATAACGCTGGCATCGCC CTTCCGCAAAAACTGGAATCTCTCGACCTGCCATCTCTCCAAACGGTATTCGACTTGAATGTGCGCGCTGCAGTTCAAGT TACACAGGCTTGCCTTCCCTCATTGAAACAGTCGCCAGCAGGACGCATCGTGAACGTTTGCAGTCGCGCGATTCACGGCG CACGCGATAGAACGTCATATGCTGCCGCAAAGAGCGCGCTGATTGGGGTCACCCGTACTTGGGCCCTCGAACTCGCACCG CTCGGCATTACCGCCAACGCCGTTGCTCCGGGCCCGGTTGAAACGGAGCTCTTCCGTTTGACGCACCCCGTCGGTAGCGA CGAGGAGAAAAGGATTCTCGCTACGATTCCCATGCAGCGACTGGGCAAGCCGGAGGAAGTAGCGTCCTTGATCTCGTACC TCATCTCGGACGGGGCCTCCTTCGTTACTGGCCAGGTGATCGGCATAGACGGTGGCGGAAGCTTAGGGGGACGCTAA
Upstream 100 bases:
>100_bases CAAAAGTGGCGCTCCACGTAGCGCTGGCATCAGTGCTTCTTTGGCTTCCGCTGTTCCTGCTTCTTGTACCATTACTCGCT ACTTTGATCGGGAACATGAC
Downstream 100 bases:
>100_bases CATCCCGCATCATGACGGACCCCGCATCGACCTGGTTAATGGCGACGTCGCAGCTTCCAGAGAAATTGCGACTTGTCGCG GCACATACGTTCGCCACTCG
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MAERRTALVTGATKGIGLALSKHLQQLGWSVIGVARHAIEGFPGQLLTADLADIQQTDAVLAQVVAASRIDAVINNAGIA LPQKLESLDLPSLQTVFDLNVRAAVQVTQACLPSLKQSPAGRIVNVCSRAIHGARDRTSYAAAKSALIGVTRTWALELAP LGITANAVAPGPVETELFRLTHPVGSDEEKRILATIPMQRLGKPEEVASLISYLISDGASFVTGQVIGIDGGGSLGGR
Sequences:
>Translated_238_residues MAERRTALVTGATKGIGLALSKHLQQLGWSVIGVARHAIEGFPGQLLTADLADIQQTDAVLAQVVAASRIDAVINNAGIA LPQKLESLDLPSLQTVFDLNVRAAVQVTQACLPSLKQSPAGRIVNVCSRAIHGARDRTSYAAAKSALIGVTRTWALELAP LGITANAVAPGPVETELFRLTHPVGSDEEKRILATIPMQRLGKPEEVASLISYLISDGASFVTGQVIGIDGGGSLGGR >Mature_237_residues AERRTALVTGATKGIGLALSKHLQQLGWSVIGVARHAIEGFPGQLLTADLADIQQTDAVLAQVVAASRIDAVINNAGIAL PQKLESLDLPSLQTVFDLNVRAAVQVTQACLPSLKQSPAGRIVNVCSRAIHGARDRTSYAAAKSALIGVTRTWALELAPL GITANAVAPGPVETELFRLTHPVGSDEEKRILATIPMQRLGKPEEVASLISYLISDGASFVTGQVIGIDGGGSLGGR
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=30.4526748971193, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI7705925, Length=237, Percent_Identity=32.4894514767932, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI66933014, Length=205, Percent_Identity=32.1951219512195, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=28.4, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=32.6612903225806, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI7657478, Length=187, Percent_Identity=33.6898395721925, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=27.4193548387097, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI109715829, Length=245, Percent_Identity=33.0612244897959, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=29.9595141700405, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=27.8008298755187, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=27.0491803278689, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI59889578, Length=205, Percent_Identity=30.7317073170732, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI223718074, Length=204, Percent_Identity=30.8823529411765, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=29.8804780876494, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI4504503, Length=220, Percent_Identity=30.4545454545455, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4503301, Length=182, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI4504505, Length=232, Percent_Identity=26.7241379310345, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1786812, Length=242, Percent_Identity=33.4710743801653, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=34.251968503937, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=31.5789473684211, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1789208, Length=244, Percent_Identity=32.3770491803279, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=34.8, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI2367365, Length=236, Percent_Identity=30.9322033898305, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1790717, Length=243, Percent_Identity=28.3950617283951, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=26.3374485596708, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=27.6859504132231, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=30.6451612903226, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1786701, Length=195, Percent_Identity=28.2051282051282, Blast_Score=68, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17560676, Length=243, Percent_Identity=30.4526748971193, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=32.1428571428571, Blast_Score=106, Evalue=9e-24, Organism=Caenorhabditis elegans, GI115534694, Length=238, Percent_Identity=32.3529411764706, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=33.6, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=29.368029739777, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=30.0380228136882, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=31.8181818181818, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17560150, Length=263, Percent_Identity=30.0380228136882, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=31.1111111111111, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=31.0756972111554, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=30.0380228136882, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=30.8880308880309, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=31.0344827586207, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538480, Length=260, Percent_Identity=31.1538461538462, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=31.1475409836066, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17565030, Length=270, Percent_Identity=31.8518518518519, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=29.5019157088123, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=29.6153846153846, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17568967, Length=235, Percent_Identity=30.6382978723404, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=31.5384615384615, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17562908, Length=259, Percent_Identity=30.5019305019305, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI72000259, Length=257, Percent_Identity=29.9610894941634, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=29.6153846153846, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17561272, Length=197, Percent_Identity=29.4416243654822, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17536025, Length=246, Percent_Identity=28.0487804878049, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=28.735632183908, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538182, Length=253, Percent_Identity=28.8537549407115, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=26.4822134387352, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=27.4809160305344, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=185, Percent_Identity=31.3513513513514, Blast_Score=92, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6323882, Length=251, Percent_Identity=30.6772908366534, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322861, Length=147, Percent_Identity=29.9319727891156, Blast_Score=63, Evalue=5e-11, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=35.4838709677419, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=37.9591836734694, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=34.4, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=34.7826086956522, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI21355319, Length=244, Percent_Identity=30.7377049180328, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=30.7377049180328, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24644337, Length=173, Percent_Identity=36.9942196531792, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=30.1587301587302, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI18859837, Length=241, Percent_Identity=26.9709543568465, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21358495, Length=190, Percent_Identity=26.8421052631579, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 24796; Mature: 24665
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERRTALVTGATKGIGLALSKHLQQLGWSVIGVARHAIEGFPGQLLTADLADIQQTDAV CCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LAQVVAASRIDAVINNAGIALPQKLESLDLPSLQTVFDLNVRAAVQVTQACLPSLKQSPA HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCC GRIVNVCSRAIHGARDRTSYAAAKSALIGVTRTWALELAPLGITANAVAPGPVETELFRL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCCCCCHHHHHHH THPVGSDEEKRILATIPMQRLGKPEEVASLISYLISDGASFVTGQVIGIDGGGSLGGR HCCCCCCCCCEEHEECCHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure AERRTALVTGATKGIGLALSKHLQQLGWSVIGVARHAIEGFPGQLLTADLADIQQTDAV CCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LAQVVAASRIDAVINNAGIALPQKLESLDLPSLQTVFDLNVRAAVQVTQACLPSLKQSPA HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCC GRIVNVCSRAIHGARDRTSYAAAKSALIGVTRTWALELAPLGITANAVAPGPVETELFRL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCCCCCHHHHHHH THPVGSDEEKRILATIPMQRLGKPEEVASLISYLISDGASFVTGQVIGIDGGGSLGGR HCCCCCCCCCEEHEECCHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]