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The map label for this gene is ppd [H]

Identifier: 94310747

GI number: 94310747

Start: 1961124

End: 1962323

Strand: Direct

Name: ppd [H]

Synonym: Rmet_1809

Alternate gene names: 94310747

Gene position: 1961124-1962323 (Clockwise)

Preceding gene: 94310746

Following gene: 94310748

Centisome position: 49.93

GC content: 68.33

Gene sequence:

>1200_bases
ATGATCGAGGCCGTCCAGTTCGTGGAAGCCGCGCGCGAGCGCGGTTTCGAGTGGTACGCGGGCGTACCGTGCTCGTACCT
GACGCCGTTCATCAATTACGTGGTGCAGGACCCTTCCCTGCATTACGTGTCGGCCGCCAATGAAGGCGATGCCGTGGCCT
TTATCGCTGGCGTGACGCAGGGCGCGCGCAATGGCGTGCGCGGCATCACGATGATGCAGAACTCGGGCCTTGGCAACGCG
GTGAGCCCGCTCACCTCGCTGACGTGGACGTTCCGCCTGCCGCAGTTGCTGATCGTCACGTGGCGCGGACAACCCGGCGG
CGCGTCGGACGAGCCTCAGCACGCGCTGATGGGCCCGGTCACGCCTGCCATGCTCGACACGATGGAGATCCCGTGGGAGC
TGTTCCCGACCGAGCCTGATGCCGTGGGCCCGGCGCTGGACCGCGCCATCGCCCATATGGATGCCACCGGCCGGCCGTAC
GCGCTGATCATGCAGAAGGGCAGCGTGGCGCCCTACCCGCTCAAGACGCAGACGCCACCCGTGGCGCGCGCGAAGGCAAC
GCCGCAAGTGTCGCGTTCCGGCGCCACGCCGCTGCCAAGCCGCCAGGAAGCGCTGCAACGCGTGATCGCCCACACGCCGG
CGGATTCCACCGTCGTACTGGCCTCCACCGGCTTCTGCGGTCGTGAACTGTACGCGCTCGACGATCGTCCCAACCAGCTT
TACATGGTTGGCTCGATGGGCTGCCTGACGCCGTTCGCGCTGGGGCTGGCCATGGCGCGTCCGGACCTGAAGGTCGTGGC
CGTCGACGGCGACGGCGCGGCGCTGATGCGCATGGGCGTGTTCGCCACGCTCGGCGCGTATGGCCCGGCCAACCTGACGC
ACGTGCTGCTGGATAACAACGCACATGATTCGACCGGCGGTCAGGCCACGGTATCGCACAACGTCTCGTTCGCAGGTGTT
GCCGCGGCGTGCGGCTATGCCTCGGCGATCGAGGGCGACGATCTCGACATGCTCGACCGCGTGCTGGCCAGCGCCGCCAC
GGCGACATCGGGCCCGAATTTCGTCTGCCTGCAGACCCGCGCCGGCACGCCTGACGGGCTGCCGCGTCCGTCGGTGACGC
CGGTGGAAGTCAAGACGCGCCTTGGCCGCCAGATCGGCGCCGACCAGGGCCATGCCGGAGAGAAGCATGCTGCTGCTTAA

Upstream 100 bases:

>100_bases
GGCGCGGCGTGAACGACCTGGAGGACTTCCGCCGGGCCGGAGACTTCGCGCACACGCAAACGCCGTACGCGCTGGGCAAC
AACGACGGAGAGACTGCCCG

Downstream 100 bases:

>100_bases
CCCGGGCCCCGTCACGCTTTCGGAACGCGTGCGCCGGAGCCTGCTGCAAACCGACCTGTGCCATCGCGAAAGCGAGTTTT
TCGACCTGCAGGACGAAGCG

Product: phosphonopyruvate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIEAVQFVEAARERGFEWYAGVPCSYLTPFINYVVQDPSLHYVSAANEGDAVAFIAGVTQGARNGVRGITMMQNSGLGNA
VSPLTSLTWTFRLPQLLIVTWRGQPGGASDEPQHALMGPVTPAMLDTMEIPWELFPTEPDAVGPALDRAIAHMDATGRPY
ALIMQKGSVAPYPLKTQTPPVARAKATPQVSRSGATPLPSRQEALQRVIAHTPADSTVVLASTGFCGRELYALDDRPNQL
YMVGSMGCLTPFALGLAMARPDLKVVAVDGDGAALMRMGVFATLGAYGPANLTHVLLDNNAHDSTGGQATVSHNVSFAGV
AAACGYASAIEGDDLDMLDRVLASAATATSGPNFVCLQTRAGTPDGLPRPSVTPVEVKTRLGRQIGADQGHAGEKHAAA

Sequences:

>Translated_399_residues
MIEAVQFVEAARERGFEWYAGVPCSYLTPFINYVVQDPSLHYVSAANEGDAVAFIAGVTQGARNGVRGITMMQNSGLGNA
VSPLTSLTWTFRLPQLLIVTWRGQPGGASDEPQHALMGPVTPAMLDTMEIPWELFPTEPDAVGPALDRAIAHMDATGRPY
ALIMQKGSVAPYPLKTQTPPVARAKATPQVSRSGATPLPSRQEALQRVIAHTPADSTVVLASTGFCGRELYALDDRPNQL
YMVGSMGCLTPFALGLAMARPDLKVVAVDGDGAALMRMGVFATLGAYGPANLTHVLLDNNAHDSTGGQATVSHNVSFAGV
AAACGYASAIEGDDLDMLDRVLASAATATSGPNFVCLQTRAGTPDGLPRPSVTPVEVKTRLGRQIGADQGHAGEKHAAA
>Mature_399_residues
MIEAVQFVEAARERGFEWYAGVPCSYLTPFINYVVQDPSLHYVSAANEGDAVAFIAGVTQGARNGVRGITMMQNSGLGNA
VSPLTSLTWTFRLPQLLIVTWRGQPGGASDEPQHALMGPVTPAMLDTMEIPWELFPTEPDAVGPALDRAIAHMDATGRPY
ALIMQKGSVAPYPLKTQTPPVARAKATPQVSRSGATPLPSRQEALQRVIAHTPADSTVVLASTGFCGRELYALDDRPNQL
YMVGSMGCLTPFALGLAMARPDLKVVAVDGDGAALMRMGVFATLGAYGPANLTHVLLDNNAHDSTGGQATVSHNVSFAGV
AAACGYASAIEGDDLDMLDRVLASAATATSGPNFVCLQTRAGTPDGLPRPSVTPVEVKTRLGRQIGADQGHAGEKHAAA

Specific function: Unknown

COG id: COG0028

COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TPP enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017684
- InterPro:   IPR012001
- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C; PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.82 [H]

Molecular weight: Translated: 41832; Mature: 41832

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00187 TPP_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEAVQFVEAARERGFEWYAGVPCSYLTPFINYVVQDPSLHYVSAANEGDAVAFIAGVTQ
CCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCH
GARNGVRGITMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGQPGGASDEPQHALMGPV
HHCCCCCEEEEEECCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCCCHHHCCCC
TPAMLDTMEIPWELFPTEPDAVGPALDRAIAHMDATGRPYALIMQKGSVAPYPLKTQTPP
CHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
VARAKATPQVSRSGATPLPSRQEALQRVIAHTPADSTVVLASTGFCGRELYALDDRPNQL
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCEE
YMVGSMGCLTPFALGLAMARPDLKVVAVDGDGAALMRMGVFATLGAYGPANLTHVLLDNN
EEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC
AHDSTGGQATVSHNVSFAGVAAACGYASAIEGDDLDMLDRVLASAATATSGPNFVCLQTR
CCCCCCCEEEEECCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEC
AGTPDGLPRPSVTPVEVKTRLGRQIGADQGHAGEKHAAA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIEAVQFVEAARERGFEWYAGVPCSYLTPFINYVVQDPSLHYVSAANEGDAVAFIAGVTQ
CCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCH
GARNGVRGITMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGQPGGASDEPQHALMGPV
HHCCCCCEEEEEECCCCCCHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCCCHHHCCCC
TPAMLDTMEIPWELFPTEPDAVGPALDRAIAHMDATGRPYALIMQKGSVAPYPLKTQTPP
CHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCC
VARAKATPQVSRSGATPLPSRQEALQRVIAHTPADSTVVLASTGFCGRELYALDDRPNQL
CCCCCCCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCEE
YMVGSMGCLTPFALGLAMARPDLKVVAVDGDGAALMRMGVFATLGAYGPANLTHVLLDNN
EEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCC
AHDSTGGQATVSHNVSFAGVAAACGYASAIEGDDLDMLDRVLASAATATSGPNFVCLQTR
CCCCCCCEEEEECCCCHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEC
AGTPDGLPRPSVTPVEVKTRLGRQIGADQGHAGEKHAAA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10786631 [H]