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The map label for this gene is ydhK [H]

Identifier: 94310734

GI number: 94310734

Start: 1948343

End: 1950220

Strand: Direct

Name: ydhK [H]

Synonym: Rmet_1796

Alternate gene names: 94310734

Gene position: 1948343-1950220 (Clockwise)

Preceding gene: 94310732

Following gene: 94310735

Centisome position: 49.6

GC content: 66.77

Gene sequence:

>1878_bases
ATGGCTAGCTGGCCGAATGCCCGACAGTGGCTGTTTTCGCTGAAGGCATTCGCTGCCGCGATGCTGGCGCTCTACATCGC
ACTGTATTTCGGCCTGCCGCGCCCCTACTGGGCCATGGCCACGGTCTATTTTGTCTCCCATCCGCTGACGGGCGCGACGC
GCTCGAAGGCCGCCTATCGCGTGGCCGGTACCGTGCTCGGCGCCACCGCGGCAGTGGCGACGGTGCCGCAACTGGTCAAT
ATGCCGATCGTGCTGATGGGCGCGATCTCCCTCTGGATCATGGTGCTGGTCTACCTGTCGCTGCTGCAACGGTCACCGCG
CAGCTACGTGTTCCTGCTGGCCGCCTACACGCTGCCGATCGTCGCGCTGCCGGCGGTGATGCACCCGGGCGACATCTTCG
ACATCGCGGTGGCCCGGATCGAGGAGATCGTGATCGGGATCGTCTGCGCGGGGCTGGTCGGATCGATCGTCTTTCCCGCG
AAAGTGGCGCCAGCGCTGCGAGACCGCATCCGCATCTGGCTGCACGACGCGGCCGCATGGGCCAACGATATCGTCAATGC
CAGCCCCCGTGCCGATGCCAGCCGTCACCGTCTAGCCGCCGATATGCTGGCGCTCGACCAGTTGATCGCGCAGCTTTCGT
TCGATACCGACAGCCAGCAGACGCTGCACCACGCCCGCGCGCTGCGTGCGCGGATGTCGGGGTTGATGCCGATCCTGTCG
GCGCTGGAAAGCGTGCTGCATGCACTGCGCACGACGCCCGAAGGCAGCGAGCGCGAAGCCCTGACCCGTACCGCCACCCA
TCTGCAGGCGCAGTTCAACCGGCTGATGCGGACCTGCGAGAGGCTGCAGCACGGCATCAGCGACCACCCGCCCGACCTGC
CCCCCGAGGAACCGGCAGGCGCCGAGCAGGCCGCGGACGAGGCGGCCGCGTATCACGACCACGCCATGTTGCTGTTCGGC
GCGGTGTCGGCCGGACTGGCGGTGTTCTGCGTCGGGCTGCTCTGGATCTTCTCGGGCTGGGAGGATGGCGGCGGCCCCGT
GGCCGTGGCGTCGATCGCAAGCTGCTTTTTCGCGACCATCGACGAGCCCCGTCCGGTGGCGCGCATGTTCCTGCGCTGGA
GCGCCGCGTGCCTGCTGATTGCATCGTTCTACCTGTTCATGGTGATTCCGCACGCGCAGACGTTCGAGACCCTGGTGGGG
ATGTTGTCCGTGCCCTACCTTGGCATTGGCATGTTGATCCAGCGGCCAGGATTCAATCTGATCGCGATGCTGCTATCGGT
GAATACGGCGTCGTTCGCCAACGTGCAGAGCGTCTACGACACAAACTTCCTCGGCATCTTCAATACGAGCCTGGCCAATG
CGGCGGCCATGCTGTTCGCACCGGTCTGGGCGATGCTGGCGCGGCCTTTCGGCGCCCATGTGGCCGCGCACCGCCTGCTG
CGCGCGAGCTGGCAGGACCTGGCGCACGCCGCCACGTGGCGCGCTGCGGACATCCATACGCAGCTTGGCGCCCGGATGCT
CGACCGGCTGGGCCAGTTGATGCCACGCCTGGGCGCCAGCCGGGGGCGGCTGGCATCCGATGGGTTTACGGAGTTGCAGA
TCGGCTACTGCACGCTGGCGCTGCAGCGCGCGCTGCCGTCATTGCCGCCAGCTGCGCGCAAACCCATCAGGCGGGTGTTG
AGCATCGTGGCACGCCACTTCCGGGCGCGCGCGCGCGCCGGGCATGTGGTACCCGTGCCGATGCCACTGCGGCAGTGGCT
CGATACCTCGATCGGACAGGTCATGGCGGCGCGTGGCGATAACCAGCAGATGGCGGCTGTACTGAGCGCGCTCGTGGTGC
TTCGCCTCACGATGCAAACGCATGAAAAAAACGACTGA

Upstream 100 bases:

>100_bases
AGACCGGAATTTTAAATCATGTTTGGAATGTTCGCAGGGCCGTTACACTTCCGCTCCTACGCCCCCACCGAGGTCCGGTC
GCACCGGCCCCACACAAATC

Downstream 100 bases:

>100_bases
TTCGGAGATTTTTAAATCATCACCGGAATACTTCCGACTCACTACACTTCATCCCGTGCCGCACCTCCCCCCAAGTACGG
CACCGCTCACAAGGCGTACC

Product: efflux transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 624

Protein sequence:

>625_residues
MASWPNARQWLFSLKAFAAAMLALYIALYFGLPRPYWAMATVYFVSHPLTGATRSKAAYRVAGTVLGATAAVATVPQLVN
MPIVLMGAISLWIMVLVYLSLLQRSPRSYVFLLAAYTLPIVALPAVMHPGDIFDIAVARIEEIVIGIVCAGLVGSIVFPA
KVAPALRDRIRIWLHDAAAWANDIVNASPRADASRHRLAADMLALDQLIAQLSFDTDSQQTLHHARALRARMSGLMPILS
ALESVLHALRTTPEGSEREALTRTATHLQAQFNRLMRTCERLQHGISDHPPDLPPEEPAGAEQAADEAAAYHDHAMLLFG
AVSAGLAVFCVGLLWIFSGWEDGGGPVAVASIASCFFATIDEPRPVARMFLRWSAACLLIASFYLFMVIPHAQTFETLVG
MLSVPYLGIGMLIQRPGFNLIAMLLSVNTASFANVQSVYDTNFLGIFNTSLANAAAMLFAPVWAMLARPFGAHVAAHRLL
RASWQDLAHAATWRAADIHTQLGARMLDRLGQLMPRLGASRGRLASDGFTELQIGYCTLALQRALPSLPPAARKPIRRVL
SIVARHFRARARAGHVVPVPMPLRQWLDTSIGQVMAARGDNQQMAAVLSALVVLRLTMQTHEKND

Sequences:

>Translated_625_residues
MASWPNARQWLFSLKAFAAAMLALYIALYFGLPRPYWAMATVYFVSHPLTGATRSKAAYRVAGTVLGATAAVATVPQLVN
MPIVLMGAISLWIMVLVYLSLLQRSPRSYVFLLAAYTLPIVALPAVMHPGDIFDIAVARIEEIVIGIVCAGLVGSIVFPA
KVAPALRDRIRIWLHDAAAWANDIVNASPRADASRHRLAADMLALDQLIAQLSFDTDSQQTLHHARALRARMSGLMPILS
ALESVLHALRTTPEGSEREALTRTATHLQAQFNRLMRTCERLQHGISDHPPDLPPEEPAGAEQAADEAAAYHDHAMLLFG
AVSAGLAVFCVGLLWIFSGWEDGGGPVAVASIASCFFATIDEPRPVARMFLRWSAACLLIASFYLFMVIPHAQTFETLVG
MLSVPYLGIGMLIQRPGFNLIAMLLSVNTASFANVQSVYDTNFLGIFNTSLANAAAMLFAPVWAMLARPFGAHVAAHRLL
RASWQDLAHAATWRAADIHTQLGARMLDRLGQLMPRLGASRGRLASDGFTELQIGYCTLALQRALPSLPPAARKPIRRVL
SIVARHFRARARAGHVVPVPMPLRQWLDTSIGQVMAARGDNQQMAAVLSALVVLRLTMQTHEKND
>Mature_624_residues
ASWPNARQWLFSLKAFAAAMLALYIALYFGLPRPYWAMATVYFVSHPLTGATRSKAAYRVAGTVLGATAAVATVPQLVNM
PIVLMGAISLWIMVLVYLSLLQRSPRSYVFLLAAYTLPIVALPAVMHPGDIFDIAVARIEEIVIGIVCAGLVGSIVFPAK
VAPALRDRIRIWLHDAAAWANDIVNASPRADASRHRLAADMLALDQLIAQLSFDTDSQQTLHHARALRARMSGLMPILSA
LESVLHALRTTPEGSEREALTRTATHLQAQFNRLMRTCERLQHGISDHPPDLPPEEPAGAEQAADEAAAYHDHAMLLFGA
VSAGLAVFCVGLLWIFSGWEDGGGPVAVASIASCFFATIDEPRPVARMFLRWSAACLLIASFYLFMVIPHAQTFETLVGM
LSVPYLGIGMLIQRPGFNLIAMLLSVNTASFANVQSVYDTNFLGIFNTSLANAAAMLFAPVWAMLARPFGAHVAAHRLLR
ASWQDLAHAATWRAADIHTQLGARMLDRLGQLMPRLGASRGRLASDGFTELQIGYCTLALQRALPSLPPAARKPIRRVLS
IVARHFRARARAGHVVPVPMPLRQWLDTSIGQVMAARGDNQQMAAVLSALVVLRLTMQTHEKND

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]

Homologues:

Organism=Escherichia coli, GI1787933, Length=540, Percent_Identity=25, Blast_Score=105, Evalue=1e-23,
Organism=Escherichia coli, GI1789636, Length=477, Percent_Identity=24.7379454926625, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 68057; Mature: 67925

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASWPNARQWLFSLKAFAAAMLALYIALYFGLPRPYWAMATVYFVSHPLTGATRSKAAYR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
VAGTVLGATAAVATVPQLVNMPIVLMGAISLWIMVLVYLSLLQRSPRSYVFLLAAYTLPI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VALPAVMHPGDIFDIAVARIEEIVIGIVCAGLVGSIVFPAKVAPALRDRIRIWLHDAAAW
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANDIVNASPRADASRHRLAADMLALDQLIAQLSFDTDSQQTLHHARALRARMSGLMPILS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALESVLHALRTTPEGSEREALTRTATHLQAQFNRLMRTCERLQHGISDHPPDLPPEEPAG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AEQAADEAAAYHDHAMLLFGAVSAGLAVFCVGLLWIFSGWEDGGGPVAVASIASCFFATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
DEPRPVARMFLRWSAACLLIASFYLFMVIPHAQTFETLVGMLSVPYLGIGMLIQRPGFNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAMLLSVNTASFANVQSVYDTNFLGIFNTSLANAAAMLFAPVWAMLARPFGAHVAAHRLL
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RASWQDLAHAATWRAADIHTQLGARMLDRLGQLMPRLGASRGRLASDGFTELQIGYCTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LQRALPSLPPAARKPIRRVLSIVARHFRARARAGHVVPVPMPLRQWLDTSIGQVMAARGD
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCCC
NQQMAAVLSALVVLRLTMQTHEKND
CHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASWPNARQWLFSLKAFAAAMLALYIALYFGLPRPYWAMATVYFVSHPLTGATRSKAAYR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
VAGTVLGATAAVATVPQLVNMPIVLMGAISLWIMVLVYLSLLQRSPRSYVFLLAAYTLPI
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VALPAVMHPGDIFDIAVARIEEIVIGIVCAGLVGSIVFPAKVAPALRDRIRIWLHDAAAW
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANDIVNASPRADASRHRLAADMLALDQLIAQLSFDTDSQQTLHHARALRARMSGLMPILS
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALESVLHALRTTPEGSEREALTRTATHLQAQFNRLMRTCERLQHGISDHPPDLPPEEPAG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AEQAADEAAAYHDHAMLLFGAVSAGLAVFCVGLLWIFSGWEDGGGPVAVASIASCFFATI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
DEPRPVARMFLRWSAACLLIASFYLFMVIPHAQTFETLVGMLSVPYLGIGMLIQRPGFNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAMLLSVNTASFANVQSVYDTNFLGIFNTSLANAAAMLFAPVWAMLARPFGAHVAAHRLL
HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RASWQDLAHAATWRAADIHTQLGARMLDRLGQLMPRLGASRGRLASDGFTELQIGYCTLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LQRALPSLPPAARKPIRRVLSIVARHFRARARAGHVVPVPMPLRQWLDTSIGQVMAARGD
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHCCC
NQQMAAVLSALVVLRLTMQTHEKND
CHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]