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The map label for this gene is 94310589

Identifier: 94310589

GI number: 94310589

Start: 1782196

End: 1782924

Strand: Reverse

Name: 94310589

Synonym: Rmet_1647

Alternate gene names: NA

Gene position: 1782924-1782196 (Counterclockwise)

Preceding gene: 94310590

Following gene: 94310587

Centisome position: 45.39

GC content: 69.14

Gene sequence:

>729_bases
ATGAATCTTGTGCGCCACCCTGACCTGCTCGACCGCATGGCCGCCCAGTACGCATTGGGCGTGCTGCGCGGTGGCGCGCG
CCGTCGCATGGAGCAAATGGCGCGCCAGGAGCCCGCCGTGCGCGTGGCGATTGCCCATTGGCAGGCACGACTGGCTGGGG
TGGCCGAGCTGCAAGCGCGGGCCGTTCCCGTAGAAGCCGTCTGGTGCGGCATCGAGCGACGGCTAGGCTGGAAAGCCGAT
CCCGCCGAGGCACAGCCGACACGCACGACTGGCTGGCGTCACGTCTGGCAGGCCGCGAGCTTCTGGCGAGGCGCCACGGC
GGCGATGACGGTCATCGCGCTGATCGCCGTTATTGCCACCATAGGCCTCGGGCCCGAGCGACGGCCGAGTCCCTCCACAG
TGGTTGCCTTGCTGCAGTCGCAACAATCCCGGGCTGCCATGCTGGTCAGTTGGGATCCAACCGGCCCCGCCCTGGTGGTT
CGCAGGCTCGACGACCTGACGCTGACAAACCAGCAGGTCCTCCAGCTTTGGGCGCTCCCCGTGGATGGCAAGCCTCAGTC
GCTGGGCGTGATTGGCCGCGCGCGCCAGGTTCGCCTGCCGCTGGCCACGCTGCCCGCCAACGTGCCGACCCTGGCGGTCA
GCATCGAGCCACTCGGCGGGTCCACCAATCCGGATGGGCCGAGCGGGCCAGTCGTGTTCCATGGCGCCTTGCTGAAATCC
CCGCGCTGA

Upstream 100 bases:

>100_bases
ATGCCGAACTGGCCGCGCGGCTGCGCGTGCCGCTGGGCACGATCAAATCGTGGATCCGCCGTGGTCTGGAGAAGCTGCGC
GCCTGCCTGGAGGCCACGCC

Downstream 100 bases:

>100_bases
CGGGCTGAGTGACTACGGCTACGTCTTCTCCGCGCCTGGCGCCGCGTACTGATTGTCTGGCGATACCACCACCGGAGCGA
CGGGCTGGTCCATGTAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: RNA Polymerase Sigma-70 Family Protein; Conserved Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNLVRHPDLLDRMAAQYALGVLRGGARRRMEQMARQEPAVRVAIAHWQARLAGVAELQARAVPVEAVWCGIERRLGWKAD
PAEAQPTRTTGWRHVWQAASFWRGATAAMTVIALIAVIATIGLGPERRPSPSTVVALLQSQQSRAAMLVSWDPTGPALVV
RRLDDLTLTNQQVLQLWALPVDGKPQSLGVIGRARQVRLPLATLPANVPTLAVSIEPLGGSTNPDGPSGPVVFHGALLKS
PR

Sequences:

>Translated_242_residues
MNLVRHPDLLDRMAAQYALGVLRGGARRRMEQMARQEPAVRVAIAHWQARLAGVAELQARAVPVEAVWCGIERRLGWKAD
PAEAQPTRTTGWRHVWQAASFWRGATAAMTVIALIAVIATIGLGPERRPSPSTVVALLQSQQSRAAMLVSWDPTGPALVV
RRLDDLTLTNQQVLQLWALPVDGKPQSLGVIGRARQVRLPLATLPANVPTLAVSIEPLGGSTNPDGPSGPVVFHGALLKS
PR
>Mature_242_residues
MNLVRHPDLLDRMAAQYALGVLRGGARRRMEQMARQEPAVRVAIAHWQARLAGVAELQARAVPVEAVWCGIERRLGWKAD
PAEAQPTRTTGWRHVWQAASFWRGATAAMTVIALIAVIATIGLGPERRPSPSTVVALLQSQQSRAAMLVSWDPTGPALVV
RRLDDLTLTNQQVLQLWALPVDGKPQSLGVIGRARQVRLPLATLPANVPTLAVSIEPLGGSTNPDGPSGPVVFHGALLKS
PR

Specific function: Unknown

COG id: COG5343

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26109; Mature: 26109

Theoretical pI: Translated: 11.94; Mature: 11.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVRHPDLLDRMAAQYALGVLRGGARRRMEQMARQEPAVRVAIAHWQARLAGVAELQAR
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHH
AVPVEAVWCGIERRLGWKADPAEAQPTRTTGWRHVWQAASFWRGATAAMTVIALIAVIAT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IGLGPERRPSPSTVVALLQSQQSRAAMLVSWDPTGPALVVRRLDDLTLTNQQVLQLWALP
HCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCC
VDGKPQSLGVIGRARQVRLPLATLPANVPTLAVSIEPLGGSTNPDGPSGPVVFHGALLKS
CCCCCCCCCHHCCCCEEECCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEHHHHCC
PR
CC
>Mature Secondary Structure
MNLVRHPDLLDRMAAQYALGVLRGGARRRMEQMARQEPAVRVAIAHWQARLAGVAELQAR
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHH
AVPVEAVWCGIERRLGWKADPAEAQPTRTTGWRHVWQAASFWRGATAAMTVIALIAVIAT
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IGLGPERRPSPSTVVALLQSQQSRAAMLVSWDPTGPALVVRRLDDLTLTNQQVLQLWALP
HCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCC
VDGKPQSLGVIGRARQVRLPLATLPANVPTLAVSIEPLGGSTNPDGPSGPVVFHGALLKS
CCCCCCCCCHHCCCCEEECCHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEHHHHCC
PR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA