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The map label for this gene is dppB [H]

Identifier: 94310557

GI number: 94310557

Start: 1741484

End: 1742506

Strand: Direct

Name: dppB [H]

Synonym: Rmet_1615

Alternate gene names: 94310557

Gene position: 1741484-1742506 (Clockwise)

Preceding gene: 94310552

Following gene: 94310558

Centisome position: 44.33

GC content: 62.46

Gene sequence:

>1023_bases
GTGCACGCGGAGGTTATCGTGAATTTTCTGTCTTTCTTTCTATCCCGGCTGGTCAAGGCACTGGTGGTGGTGATCGGCGT
GGTCGTCATCAACTTCTTCCTGATCCGCATGGCGCCCGGCGATCCGGCCACGGTGATGGCTGGCGAAGCTGGCGCTGGCG
ATGCCACCTATGTGACGCAGTTGCGTGAGCAGTTCGGGCTGGACCAGCCTGTGCTGACGCAACTGGGCATCTATCTCAAG
GGGGTGGCGAAGCTCGACCTCGGCTACTCGTATCGTAACCACCTGCCGGTGCTGGACCTGATCCTCGATCGCCTGCCGGC
CACCTTCTTGCTGATGAGCGGGGCATTCCTGTTCTCGATCGTGATGGGGGTGCTGTTGGGCGTGATTGCGGCGCGAACGC
GCTACGAAAACCGCCGGCGCTGGATTGACAGCGCGGTGATGTCCGGCGCGTTGCTGCTGTACGCCACGCCGTTGTTCTGG
CTCTCGCTGATGGCCATCATCCTGTTCTCCGTGGTGCTCGGCTGGTTGCCTGCTTTCGGCATGGAGAGCGTCGGGGCCGG
ATACACGGGACTGGCCCGCGTGCAGGATATCGCGCTCCATCTGGTGCTGCCGACGATTTCGTTGGGCTGCTTCTTCATGG
CTGTCTACGTGCGACTGACGCGGGCTTCGATGCTCGAGGTCATGGGCATGGACTTCGTCAAGACGGCGCGCGCCAAGGGT
GTGCCGGCCCGCCGCGTGATTCGTGTGCATGTGCTGCGTAACGCGCTGCTGCCCGTCATCACGTTTGCTGGCATCCAGCT
TGGCCAGATGGCCGGTGGCGCGGTGCTGACCGAAACCGTGTTCTCGTGGCCTGGTATTGGCCGGCTGATGTTCGATGCGC
TGCTGCAACGCGACTACCAGTTGCTGCTCGGCATCTTCTTCGTGACATCGGCGCTGGTGGTGTTCTTCAACCTGGTGACC
GACGTGGTCTACCGCTTCATCGACCCCCGTATCGCCATCGGCGGCAAGGAGGCCACGGCATGA

Upstream 100 bases:

>100_bases
GCCATTGGCCTGAACGAGTCGTTCGACAACGTCTCGATCGAGAAGAACTGATCGCGCCGCCAGGCTCCCCGGTGACAGGT
TGCCGGGGAGCGACGGGGAT

Downstream 100 bases:

>100_bases
AATCGTTCCTCAAGCGCTATTGCCGCAACTACGGCGCCATGATCGGCCTGATCGTGCTGCTGGCGGTGGTTGTGGTGTCC
TTCGTCGCGCCGATGCTCTA

Product: dipeptide ABC transporter membrane protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MHAEVIVNFLSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQLREQFGLDQPVLTQLGIYLK
GVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSIVMGVLLGVIAARTRYENRRRWIDSAVMSGALLLYATPLFW
LSLMAIILFSVVLGWLPAFGMESVGAGYTGLARVQDIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDFVKTARAKG
VPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFDALLQRDYQLLLGIFFVTSALVVFFNLVT
DVVYRFIDPRIAIGGKEATA

Sequences:

>Translated_340_residues
MHAEVIVNFLSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQLREQFGLDQPVLTQLGIYLK
GVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSIVMGVLLGVIAARTRYENRRRWIDSAVMSGALLLYATPLFW
LSLMAIILFSVVLGWLPAFGMESVGAGYTGLARVQDIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDFVKTARAKG
VPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFDALLQRDYQLLLGIFFVTSALVVFFNLVT
DVVYRFIDPRIAIGGKEATA
>Mature_340_residues
MHAEVIVNFLSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQLREQFGLDQPVLTQLGIYLK
GVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSIVMGVLLGVIAARTRYENRRRWIDSAVMSGALLLYATPLFW
LSLMAIILFSVVLGWLPAFGMESVGAGYTGLARVQDIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDFVKTARAKG
VPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFDALLQRDYQLLLGIFFVTSALVVFFNLVT
DVVYRFIDPRIAIGGKEATA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=38.9380530973451, Blast_Score=223, Evalue=1e-59,
Organism=Escherichia coli, GI1787053, Length=322, Percent_Identity=36.6459627329193, Blast_Score=201, Evalue=7e-53,
Organism=Escherichia coli, GI1787497, Length=323, Percent_Identity=34.6749226006192, Blast_Score=187, Evalue=7e-49,
Organism=Escherichia coli, GI1789888, Length=323, Percent_Identity=35.6037151702786, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1787761, Length=346, Percent_Identity=37.8612716763006, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=32.7137546468402, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1788504, Length=368, Percent_Identity=26.3586956521739, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37256; Mature: 37256

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAEVIVNFLSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHH
LREQFGLDQPVLTQLGIYLKGVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSI
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VMGVLLGVIAARTRYENRRRWIDSAVMSGALLLYATPLFWLSLMAIILFSVVLGWLPAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MESVGAGYTGLARVQDIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDFVKTARAKG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFDALLQRDYQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLLGIFFVTSALVVFFNLVTDVVYRFIDPRIAIGGKEATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MHAEVIVNFLSFFLSRLVKALVVVIGVVVINFFLIRMAPGDPATVMAGEAGAGDATYVTQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHH
LREQFGLDQPVLTQLGIYLKGVAKLDLGYSYRNHLPVLDLILDRLPATFLLMSGAFLFSI
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VMGVLLGVIAARTRYENRRRWIDSAVMSGALLLYATPLFWLSLMAIILFSVVLGWLPAFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MESVGAGYTGLARVQDIALHLVLPTISLGCFFMAVYVRLTRASMLEVMGMDFVKTARAKG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPARRVIRVHVLRNALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFDALLQRDYQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLLGIFFVTSALVVFFNLVTDVVYRFIDPRIAIGGKEATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]