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The map label for this gene is dppC [H]

Identifier: 94310558

GI number: 94310558

Start: 1742503

End: 1743342

Strand: Direct

Name: dppC [H]

Synonym: Rmet_1616

Alternate gene names: 94310558

Gene position: 1742503-1743342 (Clockwise)

Preceding gene: 94310557

Following gene: 94310559

Centisome position: 44.36

GC content: 64.05

Gene sequence:

>840_bases
ATGAAATCGTTCCTCAAGCGCTATTGCCGCAACTACGGCGCCATGATCGGCCTGATCGTGCTGCTGGCGGTGGTTGTGGT
GTCCTTCGTCGCGCCGATGCTCTACGAAGAGTCGCCCTGGATGATGGTGGCGGAACCGCTGATGAAGCCGTTCGCGGACA
TGGCCTATCCGTTCGGCACGGACATGCTGGGCCGCGACATCACCGCCGGGCTGCTGTATGGCGCGCGTGTTTCGCTGCTG
GTCGGGGTGATCTCCACGGCGGTGGCGCTGGTCGTCGGCGTGCTCGTGGGGTCCGTGGCGGGGTACTGCGGTGGCCGGAT
CGACGACGCGCTGATGCGGGTGACCGAGTTCTTCCAGACCATTCCTCAGTTGGCCATGGCAGTGGTGATCGTGGCCATCT
TCAATCCGTCGATCTACTCGATCGTTGGCGCGATCTCGGTCGTGTCGTGGCCGCCAGTAGCGCGCCTGGTGCGCGGAGAA
TTCCTGTCGCTGAAGCAGCGTGAGTTCGTGCAGGCCGCGATTGTGATCGGCCAGCGTCCACTGCGCATCATCCTGACGCA
AATCCTGCCCAATGCGATGTCGCCGATCATCGTTTCGGCGTCGTTCATGGTGGCCACCGCCATCCTGACCGAGTCGGCGC
TGTCGTTCCTGGGGCTTGGCGACCGCAACATGATGAGCTGGGGCTTCATGATCGGCGCCGCGCGCACCATGATCCGTGAA
GCCTGGTGGATGAGCGTCTGGCCCGGCGTGGCAATCCTGCTGACGGTGCTGGCGATCAACCTGATCGGGGAGGGGCTCAA
CGATGCCCTGAACCCGCAACTGCGCCGCCGCGGCGAGTAA

Upstream 100 bases:

>100_bases
TCGTGACATCGGCGCTGGTGGTGTTCTTCAACCTGGTGACCGACGTGGTCTACCGCTTCATCGACCCCCGTATCGCCATC
GGCGGCAAGGAGGCCACGGC

Downstream 100 bases:

>100_bases
GGAGCGCTACGATGACGCAGACCAATTCCTCCCGACAACCGCTGTTGTCGATCCGCGATCTTTCCATCGCGCTGCCGGCG
GGCGGCGACCGCGCGCACGC

Product: dipeptide ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKSFLKRYCRNYGAMIGLIVLLAVVVVSFVAPMLYEESPWMMVAEPLMKPFADMAYPFGTDMLGRDITAGLLYGARVSLL
VGVISTAVALVVGVLVGSVAGYCGGRIDDALMRVTEFFQTIPQLAMAVVIVAIFNPSIYSIVGAISVVSWPPVARLVRGE
FLSLKQREFVQAAIVIGQRPLRIILTQILPNAMSPIIVSASFMVATAILTESALSFLGLGDRNMMSWGFMIGAARTMIRE
AWWMSVWPGVAILLTVLAINLIGEGLNDALNPQLRRRGE

Sequences:

>Translated_279_residues
MKSFLKRYCRNYGAMIGLIVLLAVVVVSFVAPMLYEESPWMMVAEPLMKPFADMAYPFGTDMLGRDITAGLLYGARVSLL
VGVISTAVALVVGVLVGSVAGYCGGRIDDALMRVTEFFQTIPQLAMAVVIVAIFNPSIYSIVGAISVVSWPPVARLVRGE
FLSLKQREFVQAAIVIGQRPLRIILTQILPNAMSPIIVSASFMVATAILTESALSFLGLGDRNMMSWGFMIGAARTMIRE
AWWMSVWPGVAILLTVLAINLIGEGLNDALNPQLRRRGE
>Mature_279_residues
MKSFLKRYCRNYGAMIGLIVLLAVVVVSFVAPMLYEESPWMMVAEPLMKPFADMAYPFGTDMLGRDITAGLLYGARVSLL
VGVISTAVALVVGVLVGSVAGYCGGRIDDALMRVTEFFQTIPQLAMAVVIVAIFNPSIYSIVGAISVVSWPPVARLVRGE
FLSLKQREFVQAAIVIGQRPLRIILTQILPNAMSPIIVSASFMVATAILTESALSFLGLGDRNMMSWGFMIGAARTMIRE
AWWMSVWPGVAILLTVLAINLIGEGLNDALNPQLRRRGE

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=36.2264150943396, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787054, Length=279, Percent_Identity=36.5591397849462, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1787498, Length=275, Percent_Identity=38.1818181818182, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=39.3617021276596, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=33.739837398374, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1788505, Length=217, Percent_Identity=31.7972350230415, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1787549, Length=279, Percent_Identity=27.9569892473118, Blast_Score=100, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30333; Mature: 30333

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]