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The map label for this gene is ybiT [H]

Identifier: 94310517

GI number: 94310517

Start: 1694501

End: 1696123

Strand: Direct

Name: ybiT [H]

Synonym: Rmet_1575

Alternate gene names: 94310517

Gene position: 1694501-1696123 (Clockwise)

Preceding gene: 94310516

Following gene: 94310519

Centisome position: 43.14

GC content: 61.92

Gene sequence:

>1623_bases
GTGCTTTCTACCGCAAACATCACCATGCAGTTCGGCCCCAAGCCGTTGTTCGAGAATATCTCGGTCAAGTTCGGCGAGGG
TAACCGCTACGGCCTGATCGGCGCGAACGGCTGCGGCAAGTCCACCTTCATGAAGATTCTCGGCAGCGATCTGGAGCAGT
CGTCGGGCACGGTCATGCTGGAGCCGGGCATCCGTCTGGGCAAGCTGCGCCAGGACCAGTTCGCGTATGAGGACAACCGC
GTGCTCGATGTGGTGATGATGGGCCATACCGAAATGTGGGGCGCGGCGAGCGAGCGGGACGCAATCTACGCGAATCCGGA
AGCCACCGACGAAGACTACATGCACGCTGCCGAACTCGAGGCCAAGTACGCCGAGTTCGACGGCTACACGGCCGAGGCAC
GCGCTGGCGAACTGCTGCTGGGCGTGGGTATCCCGACCGATCAGCACCAGGGCCCGATGAGCGAGATCGCCCCGGGCTGG
AAGCTGCGCGTGCTGCTGGCGCAGGCGCTGTTCTCGAATCCGGATGTGCTGTTGCTCGACGAACCGACCAACAACCTGGA
CATCAACACGATCCGCTGGCTGGAAGACGTGCTCAACGAGCGCAACTCCACCATGATCATCATTTCCCACGACCGTCACT
TCCTGAACTCCGTGTGCACGCACATGGCGGACATGGACTACGGCACGCTGAAGGTCTACCCGGGCAACTACGACGACTAC
ATGCAGGCGTCGATGCAGGCCCGCGAGCGCCAGGTGGCCGCCAACGCGCGCGCCAAGGATCGAATCACCGAACTGCAGGA
CTTCGTGCGCCGCTTCTCGGCCAACAAGTCGAAGGCTCGCCAGGCCACGTCGCGCCTGAAGCAGATCGACAAGATCAAGG
TCGAGGACATCAAGCCGTCGTCGCGCCAGAACCCGTTCGTGCGCTTCGAGTTCGAGAAGAAGCTGCACAACCTGGCTGTC
GAAGCAGAGGACATCACCAAGACCTACGACCGCAAGATCATCAACAATCTGTCGATGGCGATCCAGGCTGGCGAGCGTGT
GGCCATCATCGGTGAGAACGGCGCGGGCAAAACCACGCTGCTGCGTTCCCTGCTGAACAACGTGGTGCAAACCGGCGTGC
AGCGCGGCGTGGAAGTGGACCGCGGCACGGTCAAGTGGGCCGAGAACGCCAACGTGGGCTACATGCCGCAGGACACGTAC
GAGGAATTCCCGAACGACTTGAACGTGATGGACTGGATGAGCCAGTGGACCCAGGCCGGCGATGACGACCAGTCGCTGCG
CGGCACGCTGGGCCGTCTGTTGTTCTCGGCCGACGATATCAAGAAGTCCGTCAAGGTGCTGTCTGGTGGCGAGAAGGGCC
GCATGATCTGGGGCAAGCTGATGCTGGGCCGCCATAACGTGCTGGCGATGGACGAGCCGACCAACCACATGGACATGGAG
TCGATCGAATCGCTCCAGATCGCGCTGGACAAGTTCACGGGCACGCTGGTCTTCGTGTCGCACGACCGTGAACTGATCAG
TGCTCTGGCCACGCGAGTGATCGAAGTGCGCACCGACGGGCGGATCACCGATTACCTCGGCACGTATGACGAGTACCTGC
AATCGCAGGGCATCGAGGCCTAA

Upstream 100 bases:

>100_bases
GTTATTTCCTCATTTCGCTGCGCCGGGCGCCAATGCCTGCCGCGAGCAGTCATCTCAGGGTGCCCACGCGGCACACCGAC
ATTCCAGACAAGGTTCAGAC

Downstream 100 bases:

>100_bases
AGTCGGTAAGCCGGTAAGCCTGCGTCTTTCTCCCCTGTCCCGCAATGCGGAGCAGGGGAGCTTCATGGCTAGTGCTATCG
CACCGGCGCCATTCCCATCT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGSDLEQSSGTVMLEPGIRLGKLRQDQFAYEDNR
VLDVVMMGHTEMWGAASERDAIYANPEATDEDYMHAAELEAKYAEFDGYTAEARAGELLLGVGIPTDQHQGPMSEIAPGW
KLRVLLAQALFSNPDVLLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADMDYGTLKVYPGNYDDY
MQASMQARERQVAANARAKDRITELQDFVRRFSANKSKARQATSRLKQIDKIKVEDIKPSSRQNPFVRFEFEKKLHNLAV
EAEDITKTYDRKIINNLSMAIQAGERVAIIGENGAGKTTLLRSLLNNVVQTGVQRGVEVDRGTVKWAENANVGYMPQDTY
EEFPNDLNVMDWMSQWTQAGDDDQSLRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGRHNVLAMDEPTNHMDME
SIESLQIALDKFTGTLVFVSHDRELISALATRVIEVRTDGRITDYLGTYDEYLQSQGIEA

Sequences:

>Translated_540_residues
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGSDLEQSSGTVMLEPGIRLGKLRQDQFAYEDNR
VLDVVMMGHTEMWGAASERDAIYANPEATDEDYMHAAELEAKYAEFDGYTAEARAGELLLGVGIPTDQHQGPMSEIAPGW
KLRVLLAQALFSNPDVLLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADMDYGTLKVYPGNYDDY
MQASMQARERQVAANARAKDRITELQDFVRRFSANKSKARQATSRLKQIDKIKVEDIKPSSRQNPFVRFEFEKKLHNLAV
EAEDITKTYDRKIINNLSMAIQAGERVAIIGENGAGKTTLLRSLLNNVVQTGVQRGVEVDRGTVKWAENANVGYMPQDTY
EEFPNDLNVMDWMSQWTQAGDDDQSLRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGRHNVLAMDEPTNHMDME
SIESLQIALDKFTGTLVFVSHDRELISALATRVIEVRTDGRITDYLGTYDEYLQSQGIEA
>Mature_540_residues
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGSDLEQSSGTVMLEPGIRLGKLRQDQFAYEDNR
VLDVVMMGHTEMWGAASERDAIYANPEATDEDYMHAAELEAKYAEFDGYTAEARAGELLLGVGIPTDQHQGPMSEIAPGW
KLRVLLAQALFSNPDVLLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADMDYGTLKVYPGNYDDY
MQASMQARERQVAANARAKDRITELQDFVRRFSANKSKARQATSRLKQIDKIKVEDIKPSSRQNPFVRFEFEKKLHNLAV
EAEDITKTYDRKIINNLSMAIQAGERVAIIGENGAGKTTLLRSLLNNVVQTGVQRGVEVDRGTVKWAENANVGYMPQDTY
EEFPNDLNVMDWMSQWTQAGDDDQSLRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGRHNVLAMDEPTNHMDME
SIESLQIALDKFTGTLVFVSHDRELISALATRVIEVRTDGRITDYLGTYDEYLQSQGIEA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=545, Percent_Identity=31.743119266055, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI10947137, Length=544, Percent_Identity=30.3308823529412, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI27881506, Length=544, Percent_Identity=30.3308823529412, Blast_Score=239, Evalue=6e-63,
Organism=Homo sapiens, GI10947135, Length=534, Percent_Identity=27.9026217228464, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI69354671, Length=534, Percent_Identity=27.9026217228464, Blast_Score=177, Evalue=2e-44,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=65.9259259259259, Blast_Score=751, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=538, Percent_Identity=30.6691449814126, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1787182, Length=550, Percent_Identity=29.6363636363636, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI2367384, Length=532, Percent_Identity=28.9473684210526, Blast_Score=226, Evalue=4e-60,
Organism=Escherichia coli, GI1787029, Length=248, Percent_Identity=26.2096774193548, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788165, Length=194, Percent_Identity=27.319587628866, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI145693107, Length=529, Percent_Identity=23.6294896030246, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1787712, Length=229, Percent_Identity=24.4541484716157, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788450, Length=278, Percent_Identity=23.7410071942446, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=545, Percent_Identity=31.3761467889908, Blast_Score=244, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=27.9112754158965, Blast_Score=227, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17559834, Length=542, Percent_Identity=27.4907749077491, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115533592, Length=211, Percent_Identity=27.4881516587678, Blast_Score=69, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=548, Percent_Identity=28.6496350364964, Blast_Score=227, Evalue=5e-60,
Organism=Saccharomyces cerevisiae, GI6321121, Length=560, Percent_Identity=28.2142857142857, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6323278, Length=433, Percent_Identity=25.635103926097, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324314, Length=434, Percent_Identity=24.6543778801843, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6325030, Length=427, Percent_Identity=23.6533957845433, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24666836, Length=519, Percent_Identity=29.8651252408478, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24642252, Length=527, Percent_Identity=28.842504743833, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI18859989, Length=527, Percent_Identity=28.842504743833, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI24641342, Length=547, Percent_Identity=29.0676416819013, Blast_Score=217, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60605; Mature: 60605

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGSDLEQSSGTVML
CCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCHHHCCCCEEEE
EPGIRLGKLRQDQFAYEDNRVLDVVMMGHTEMWGAASERDAIYANPEATDEDYMHAAELE
CCCCCCCCCCCHHHCCCCCCEEEEEEECCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHH
AKYAEFDGYTAEARAGELLLGVGIPTDQHQGPMSEIAPGWKLRVLLAQALFSNPDVLLLD
HHHHHCCCEECCCCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADMDYGTLKVYPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
MQASMQARERQVAANARAKDRITELQDFVRRFSANKSKARQATSRLKQIDKIKVEDIKPS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCC
SRQNPFVRFEFEKKLHNLAVEAEDITKTYDRKIINNLSMAIQAGERVAIIGENGAGKTTL
CCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCHHHH
LRSLLNNVVQTGVQRGVEVDRGTVKWAENANVGYMPQDTYEEFPNDLNVMDWMSQWTQAG
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC
DDDQSLRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGRHNVLAMDEPTNHMDME
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCHH
SIESLQIALDKFTGTLVFVSHDRELISALATRVIEVRTDGRITDYLGTYDEYLQSQGIEA
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLSTANITMQFGPKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILGSDLEQSSGTVML
CCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCHHHCCCCEEEE
EPGIRLGKLRQDQFAYEDNRVLDVVMMGHTEMWGAASERDAIYANPEATDEDYMHAAELE
CCCCCCCCCCCHHHCCCCCCEEEEEEECCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHH
AKYAEFDGYTAEARAGELLLGVGIPTDQHQGPMSEIAPGWKLRVLLAQALFSNPDVLLLD
HHHHHCCCEECCCCCCCEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADMDYGTLKVYPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
MQASMQARERQVAANARAKDRITELQDFVRRFSANKSKARQATSRLKQIDKIKVEDIKPS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCC
SRQNPFVRFEFEKKLHNLAVEAEDITKTYDRKIINNLSMAIQAGERVAIIGENGAGKTTL
CCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCHHHH
LRSLLNNVVQTGVQRGVEVDRGTVKWAENANVGYMPQDTYEEFPNDLNVMDWMSQWTQAG
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHCCC
DDDQSLRGTLGRLLFSADDIKKSVKVLSGGEKGRMIWGKLMLGRHNVLAMDEPTNHMDME
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCHH
SIESLQIALDKFTGTLVFVSHDRELISALATRVIEVRTDGRITDYLGTYDEYLQSQGIEA
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]