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The map label for this gene is uidR [C]

Identifier: 94310509

GI number: 94310509

Start: 1688473

End: 1689258

Strand: Reverse

Name: uidR [C]

Synonym: Rmet_1567

Alternate gene names: 94310509

Gene position: 1689258-1688473 (Counterclockwise)

Preceding gene: 94310510

Following gene: 94310508

Centisome position: 43.0

GC content: 63.36

Gene sequence:

>786_bases
ATGCTCGATGTTCCCATCGGCAGCGCCAAGGCATCGCCTGAGCGATCAGATCGATCTGATCGCCAGACAGATGCGACACC
CCCCAAGAACCGCAGACTCGCCCTGCAAGCCCGCAGCCAGGCAACAGAGAAAGCGCTGCTGGATGCAGGCCTGGCCCACT
TCGAAGCGCACGGATTCGAGGGCTTGTCGATGCAGGCGGTGGCTGAATACGCTGGCACATCGATCGGCGCCTTGTACTTC
CGCTTCGGAGACCGCGAAGGCTTCATTCAGGCCGTGCTGGAGCGCGGCTTCGACCAGATCCGCCAGGATACCGACGACTT
GCTGGCCAAGGTCACTACCGAGCATGCATCACCGCACGAAGTCATCAATGCCTTTGTGGACCTGGCCGTACGCGTACAGA
AGAAGAGTCATGGCGTATTCCGTGCCGTGCTGCAGCGTGCGCTGGTCGACCCCAAAGCGTGGGAGCCCGTGGGTCGCCTG
GGAAACGACGCCACGCGCCGGCTGGTGTCCGCACTGAGCCGGTTTCCGGAGGTGGTAGCCATCCCCGACTGGGAAGCGCG
CTTGATGTTCGGCGTGTACGCAGCGCGCAGCGCGCAATTCAACGCGATGTACAACAGCCAGGCGCCGCTACCCAAGGGCC
ATGTCGCCATGGTTCACGTGTTGTACGAACTTATCGTGAGCTATCTCGGCCTGCCTCCAATCGGGCGCGTCGGCCAGGGC
GCTAAGGATCAGGGCGGCCGCCCCAGGAAGCTCGCCACCTCATCGCGTACCCGCCATACGCCGTAG

Upstream 100 bases:

>100_bases
CAGAACGGAAATTGCAGCCGGCCCGCAGTTCCGGCTTGCACAATAGGCTACAGGGACTATAAATAGAACCATAAATCGAA
TTCTATTTGGGAGACACAGC

Downstream 100 bases:

>100_bases
ACATCCGCGTAGGCATTAACGGCCAGCAAATCGAGCGTTGGCTGCAAGCGACCTGACGCAGTCTGGTCGATCCCTTTCTC
TTCCTCACTCAAGGACTCCT

Product: putative transcriptional regulator, TetR-family

Products: NA

Alternate protein names: Transcriptional Regulator; TetR Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLDVPIGSAKASPERSDRSDRQTDATPPKNRRLALQARSQATEKALLDAGLAHFEAHGFEGLSMQAVAEYAGTSIGALYF
RFGDREGFIQAVLERGFDQIRQDTDDLLAKVTTEHASPHEVINAFVDLAVRVQKKSHGVFRAVLQRALVDPKAWEPVGRL
GNDATRRLVSALSRFPEVVAIPDWEARLMFGVYAARSAQFNAMYNSQAPLPKGHVAMVHVLYELIVSYLGLPPIGRVGQG
AKDQGGRPRKLATSSRTRHTP

Sequences:

>Translated_261_residues
MLDVPIGSAKASPERSDRSDRQTDATPPKNRRLALQARSQATEKALLDAGLAHFEAHGFEGLSMQAVAEYAGTSIGALYF
RFGDREGFIQAVLERGFDQIRQDTDDLLAKVTTEHASPHEVINAFVDLAVRVQKKSHGVFRAVLQRALVDPKAWEPVGRL
GNDATRRLVSALSRFPEVVAIPDWEARLMFGVYAARSAQFNAMYNSQAPLPKGHVAMVHVLYELIVSYLGLPPIGRVGQG
AKDQGGRPRKLATSSRTRHTP
>Mature_261_residues
MLDVPIGSAKASPERSDRSDRQTDATPPKNRRLALQARSQATEKALLDAGLAHFEAHGFEGLSMQAVAEYAGTSIGALYF
RFGDREGFIQAVLERGFDQIRQDTDDLLAKVTTEHASPHEVINAFVDLAVRVQKKSHGVFRAVLQRALVDPKAWEPVGRL
GNDATRRLVSALSRFPEVVAIPDWEARLMFGVYAARSAQFNAMYNSQAPLPKGHVAMVHVLYELIVSYLGLPPIGRVGQG
AKDQGGRPRKLATSSRTRHTP

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28636; Mature: 28636

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVPIGSAKASPERSDRSDRQTDATPPKNRRLALQARSQATEKALLDAGLAHFEAHGFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
GLSMQAVAEYAGTSIGALYFRFGDREGFIQAVLERGFDQIRQDTDDLLAKVTTEHASPHE
CCHHHHHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VINAFVDLAVRVQKKSHGVFRAVLQRALVDPKAWEPVGRLGNDATRRLVSALSRFPEVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCHHHHHHHHHHHHCCCEEE
IPDWEARLMFGVYAARSAQFNAMYNSQAPLPKGHVAMVHVLYELIVSYLGLPPIGRVGQG
CCCHHHHHHHHHHHHHCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
AKDQGGRPRKLATSSRTRHTP
CCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MLDVPIGSAKASPERSDRSDRQTDATPPKNRRLALQARSQATEKALLDAGLAHFEAHGFE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC
GLSMQAVAEYAGTSIGALYFRFGDREGFIQAVLERGFDQIRQDTDDLLAKVTTEHASPHE
CCHHHHHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VINAFVDLAVRVQKKSHGVFRAVLQRALVDPKAWEPVGRLGNDATRRLVSALSRFPEVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCCHHHHHHHHHHHHCCCEEE
IPDWEARLMFGVYAARSAQFNAMYNSQAPLPKGHVAMVHVLYELIVSYLGLPPIGRVGQG
CCCHHHHHHHHHHHHHCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
AKDQGGRPRKLATSSRTRHTP
CCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA