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The map label for this gene is yddU [C]

Identifier: 94310510

GI number: 94310510

Start: 1689494

End: 1689913

Strand: Reverse

Name: yddU [C]

Synonym: Rmet_1568

Alternate gene names: 94310510

Gene position: 1689913-1689494 (Counterclockwise)

Preceding gene: 94310511

Following gene: 94310509

Centisome position: 43.02

GC content: 60.71

Gene sequence:

>420_bases
ATGACAATTTCAACGAACACGGCAGCGCAAATCCTCGAACAACTCGCCGACGCACTCATCTTTGCCGATACGGACGGCCG
AATCACGGGCTGGAATCATGCTGCGGCGGAACTCTTCGGATACGGCCCGGACGAGGCGCTGGGCCAAAGTCTCGACCTGA
TCATTCCCGAGCGCCTGCAGGCCGCGCACTGGAAGGGATTTCAGGCCGCTATCGACACCGGCAAGACCCGGCTCTCCGGC
AAGCCGACACTGACCAAGGCGATCCACAAGGACGGACGCAAACTCTTTGTGGAAATGACGTTTGCGCTGATCAGCGATGC
GAACGGCAATGTCATCGGCTCAGTCGCCGTTGCACGGGATGTCACGGACAAGGTCGAGCGGGAACGCGCCCAGAGCGCTG
CGGGGCCAGTGTCAAGATAG

Upstream 100 bases:

>100_bases
GGCATCTGCGATTTGCAGCGGAGAATATCGACTGGCAATCGGGCCGCATCAGACGGCCCAATGCCGGGCGAGCGCCCCCA
CCCCACAAGACGATGAAATC

Downstream 100 bases:

>100_bases
CCCCCCTTCCTAGACGATCACCAGCAATCAAAACCCGCAGTCACTTGCGGGTTTCGACTTTCCGCCCCTGACGACGGCAA
CCGGTCAGGTTTGGCAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: PAS Sensor Protein; Transcriptional Regulator; Sensory Box Protein; Signal Transduction Histidine Kinase; Two-Component Hybrid Sensor And Regulator; PAS/PAC Sensor Hybrid Histidine Kinase; Sensor Histidine Kinase; Multi-Sensor Hybrid Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Multi-Sensor Signal Transduction Histidine Kinase; Signal-Transducing Histidine Kinase; Sigma-54 Dependent Transcriptional Regulator Fis Family; Ethylene Response Sensor Protein; Two-Component Sensor Histidine Kinase Protein; PAS/PAC Domain-Containing Protein; NMT1/THI5 Like Family; C-Like Stage II Sporulation E; Sensory Box Histidine Kinase/Response Regulator; Two-Component System Sensory/Regulatory Protein Putative; Signal Sensor Protein Isolated PAS Domain; Globin; Sensory Box/GGDEF Family Protein

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MTISTNTAAQILEQLADALIFADTDGRITGWNHAAAELFGYGPDEALGQSLDLIIPERLQAAHWKGFQAAIDTGKTRLSG
KPTLTKAIHKDGRKLFVEMTFALISDANGNVIGSVAVARDVTDKVERERAQSAAGPVSR

Sequences:

>Translated_139_residues
MTISTNTAAQILEQLADALIFADTDGRITGWNHAAAELFGYGPDEALGQSLDLIIPERLQAAHWKGFQAAIDTGKTRLSG
KPTLTKAIHKDGRKLFVEMTFALISDANGNVIGSVAVARDVTDKVERERAQSAAGPVSR
>Mature_138_residues
TISTNTAAQILEQLADALIFADTDGRITGWNHAAAELFGYGPDEALGQSLDLIIPERLQAAHWKGFQAAIDTGKTRLSGK
PTLTKAIHKDGRKLFVEMTFALISDANGNVIGSVAVARDVTDKVERERAQSAAGPVSR

Specific function: Unknown

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14861; Mature: 14730

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISTNTAAQILEQLADALIFADTDGRITGWNHAAAELFGYGPDEALGQSLDLIIPERLQ
CCCCCHHHHHHHHHHHHHEEECCCCCCEECCCHHHHHHHCCCCCHHHCCCCCCCCHHHHH
AAHWKGFQAAIDTGKTRLSGKPTLTKAIHKDGRKLFVEMTFALISDANGNVIGSVAVARD
HHHCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHHH
VTDKVERERAQSAAGPVSR
HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TISTNTAAQILEQLADALIFADTDGRITGWNHAAAELFGYGPDEALGQSLDLIIPERLQ
CCCCHHHHHHHHHHHHHEEECCCCCCEECCCHHHHHHHCCCCCHHHCCCCCCCCHHHHH
AAHWKGFQAAIDTGKTRLSGKPTLTKAIHKDGRKLFVEMTFALISDANGNVIGSVAVARD
HHHCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHHH
VTDKVERERAQSAAGPVSR
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA