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The map label for this gene is tnpA [C]

Identifier: 94310505

GI number: 94310505

Start: 1684483

End: 1685010

Strand: Direct

Name: tnpA [C]

Synonym: Rmet_1563

Alternate gene names: 94310505

Gene position: 1684483-1685010 (Clockwise)

Preceding gene: 94310504

Following gene: 94310506

Centisome position: 42.88

GC content: 57.58

Gene sequence:

>528_bases
ATGGCGAAGTACGATGAGAGCTTCAAGCGCCAGGTTGTTGAGCGCTATCTGACAGGATCTTCCGGTTTCAAGGCCTTGGG
CAAGGAACTGGGTGTGGACCCGGGAGCCATACGGCGCTGGGTTGGCAGCTATGCTCATCACGGTGCAGCAGGGCTGAGAA
AGAAATCTGTCCGGTATGGCGCGAAGTTCAAATTGTCGGTGCTACGGCGGATGTGGCGCGACGAGTTGTCCTACCGACAG
GTTGCTGCTCTGTTCGATCTGAGGGGCGGGACTGCTGTCGTCTCGGCGTGGGAACGCCAGTATCATTCGCAGGGAATAGA
CGCACTGGCGCCCAAACCACGAGGGCGTACGAAGACAATGTCGGCTCCTATACCTCCCAAGCCACCGGCCTCGAATGTCA
AAGAGACCCGCACGCTGGAAGATCTGCGTAAAGAGAACGAATACCTGCGCGCGGAGGTGGCGTACCTAAAAAAATGGAAT
GCCTTGGTTCAGGCCAAGAAAGCGGCCGCACAGAAAAAGCGCGGCTAG

Upstream 100 bases:

>100_bases
GCGCTGGCCAGAGCCGAGTAGCACCAGAGAACAAAAAAGCCCGCGTAACTGAACTGCACCCCAAAGGTTGGACACCCGTT
CAACCTTTGGGGTGTTTTTC

Downstream 100 bases:

>100_bases
TGCTCGAACTGAGGCAACACTATGATTTGGCGGCGCTACTGAAGGTTGCTGGACTGTCGCGCAGCACGTTCTATTACCAG
GCCAAGGTTATCGGGGCCGG

Product: transposase DNA binding site ISRme12

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAKYDESFKRQVVERYLTGSSGFKALGKELGVDPGAIRRWVGSYAHHGAAGLRKKSVRYGAKFKLSVLRRMWRDELSYRQ
VAALFDLRGGTAVVSAWERQYHSQGIDALAPKPRGRTKTMSAPIPPKPPASNVKETRTLEDLRKENEYLRAEVAYLKKWN
ALVQAKKAAAQKKRG

Sequences:

>Translated_175_residues
MAKYDESFKRQVVERYLTGSSGFKALGKELGVDPGAIRRWVGSYAHHGAAGLRKKSVRYGAKFKLSVLRRMWRDELSYRQ
VAALFDLRGGTAVVSAWERQYHSQGIDALAPKPRGRTKTMSAPIPPKPPASNVKETRTLEDLRKENEYLRAEVAYLKKWN
ALVQAKKAAAQKKRG
>Mature_174_residues
AKYDESFKRQVVERYLTGSSGFKALGKELGVDPGAIRRWVGSYAHHGAAGLRKKSVRYGAKFKLSVLRRMWRDELSYRQV
AALFDLRGGTAVVSAWERQYHSQGIDALAPKPRGRTKTMSAPIPPKPPASNVKETRTLEDLRKENEYLRAEVAYLKKWNA
LVQAKKAAAQKKRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS150/IS1296 orfA family [H]

Homologues:

Organism=Escherichia coli, GI1789980, Length=169, Percent_Identity=28.4023668639053, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19732; Mature: 19601

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYDESFKRQVVERYLTGSSGFKALGKELGVDPGAIRRWVGSYAHHGAAGLRKKSVRYG
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
AKFKLSVLRRMWRDELSYRQVAALFDLRGGTAVVSAWERQYHSQGIDALAPKPRGRTKTM
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SAPIPPKPPASNVKETRTLEDLRKENEYLRAEVAYLKKWNALVQAKKAAAQKKRG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKYDESFKRQVVERYLTGSSGFKALGKELGVDPGAIRRWVGSYAHHGAAGLRKKSVRYG
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHC
AKFKLSVLRRMWRDELSYRQVAALFDLRGGTAVVSAWERQYHSQGIDALAPKPRGRTKTM
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SAPIPPKPPASNVKETRTLEDLRKENEYLRAEVAYLKKWNALVQAKKAAAQKKRG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]