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The map label for this gene is trbB [H]

Identifier: 94310492

GI number: 94310492

Start: 1672583

End: 1673659

Strand: Direct

Name: trbB [H]

Synonym: Rmet_1550

Alternate gene names: 94310492

Gene position: 1672583-1673659 (Clockwise)

Preceding gene: 94310491

Following gene: 94310493

Centisome position: 42.58

GC content: 69.73

Gene sequence:

>1077_bases
ATGAGCGCCCGAATCTCCATTGAAGGGCAGTCCATGAGTGCCACGTCGCTCGACCGCCGCATCCAGATGCTGCGCACGGC
GATGGGGCCGCTGATCGCCGCCGCGCTCGAAGACCCGGACGTGGTGGAGGTGATGCTGAATCCCGATCGCACCCTTTGGG
TGGATCGGCTTTCCAGTGGGCGCGCGCCGATGGGCGTGGAACTGCCCGAGGCGGACGGCGAGCGAATCATCCGCCTCGTG
GCCGCCCACGTTGGCGCGGAAGTCCATCGCGGCCAGCCGCTGCTGTCCGCCGAGTTGCCCGAGACGGGCGAACGCTTCGA
GGGCATTTTGCCGCCGGCAGCGCCGGGGCCGGCCTTCGCGCTGCGCAAGCGGGCCATCGGCGTGATTCCGCTGGAGCGCT
ACGTCGTGGAGGGAATGATGACCGCCGCACAGGCGGGCTTTCTCGTTCGCGCCGTACGCGAGCGGCAGAACGTGCTGATC
GCCGGCGCCACCAGCAGCGGCAAGACGACCTTGGCGAACGCGCTGCTGGCCGAGATCGCCGCCACCGGCGACCGCGTGCT
GGTGCTCGAAGACACTGTGGAACTGCAATGCGCGGCCCGCGACCACGTTCCGCTGCGCACACGCGCGGGCGTGGTGTCCA
TGACGGAGCTGGTGCGCTCGTCCATGCGACTGCGGCCCGATCGTGTCGTCGTCGGCGAGGTGCGCGGCGCCGAGGCGCTG
GATCTCATCAAGGTCTGGGGCACGGGCCACCCCGGCGGCATCGCCACGATCCACGCCGGCTCCGCGCTCGGCGCGCTGCT
GCGCCTGGAGCAACTGATTCTCGAAGTGGCGGTGAACCCGCCCCGCGCGCTGATCGCGGAAGCGGTCAACGTGGTGATCC
ACATCGCCGGGCGCGGGCGCAAACGCCGCATCGAGAGCATCGCCCGCGTCGTCGGCTTCGACGGCGTGGGCTACAGGCTG
GTGGATTGGGAGGCGGATGCACTGGACACGCCGTTTCCCGAGCTGCCGCCGCTTCCCGATGCCGCACCCGCTGCGGCGAC
TTTCCCATCCCCTGACTCACTTGGAGAACTGCCATGA

Upstream 100 bases:

>100_bases
GGGGCCGCAGCCTGGTGCGTGACGTGGTGGAGGAGTTGCATCCCGACCCGATGCGAATGGAGGACGCGGCGGCAGCCACG
CAAGCGCAGGAGCGTGCGTC

Downstream 100 bases:

>100_bases
CGCAGATGACCATTCCTGCTTTCCGTTTTTCTGCAAATCCGGCTTTGCGTCTTGCGCGGCTGCGCTGCCTGGCCCGCCCT
GCGGGGCAAGGGCTGCTGCT

Product: P-type conjugative transfer ATPase TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPMGVELPEADGERIIRLV
AAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFALRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLI
AGATSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRRIESIARVVGFDGVGYRL
VDWEADALDTPFPELPPLPDAAPAAATFPSPDSLGELP

Sequences:

>Translated_358_residues
MSARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPMGVELPEADGERIIRLV
AAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFALRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLI
AGATSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRRIESIARVVGFDGVGYRL
VDWEADALDTPFPELPPLPDAAPAAATFPSPDSLGELP
>Mature_357_residues
SARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPMGVELPEADGERIIRLVA
AHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFALRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLIA
GATSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEALD
LIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRRIESIARVVGFDGVGYRLV
DWEADALDTPFPELPPLPDAAPAAATFPSPDSLGELP

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 38076; Mature: 37944

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSG
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHCCC
RAPMGVELPEADGERIIRLVAAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFA
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCEECCCCCCHHHHCCCCCCCCCCHHHH
LRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLIAGATSSGKTTLANALLAEIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH
ATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
CCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHH
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGR
HHHEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCH
KRRIESIARVVGFDGVGYRLVDWEADALDTPFPELPPLPDAAPAAATFPSPDSLGELP
HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSG
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHCCC
RAPMGVELPEADGERIIRLVAAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFA
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCEECCCCCCHHHHCCCCCCCCCCHHHH
LRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLIAGATSSGKTTLANALLAEIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH
ATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
CCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHH
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGR
HHHEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCH
KRRIESIARVVGFDGVGYRLVDWEADALDTPFPELPPLPDAAPAAATFPSPDSLGELP
HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]