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The map label for this gene is trbC

Identifier: 94310493

GI number: 94310493

Start: 1673656

End: 1674039

Strand: Direct

Name: trbC

Synonym: Rmet_1551

Alternate gene names: NA

Gene position: 1673656-1674039 (Clockwise)

Preceding gene: 94310492

Following gene: 94310494

Centisome position: 42.61

GC content: 65.36

Gene sequence:

>384_bases
ATGACGCAGATGACCATTCCTGCTTTCCGTTTTTCTGCAAATCCGGCTTTGCGTCTTGCGCGGCTGCGCTGCCTGGCCCG
CCCTGCGGGGCAAGGGCTGCTGCTGGCCGCGCTGCTGCTGTTCCTGGCCGGAACCGCGCAGGCCGCCGGCTCCTCGATGC
CGTGGGAAGGCCCGCTGCAATCCATTCTCGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATCATCATCATC
GCCACGGGCCTCGCGCTTGCGTTCGGCGACACGTCGGGCGGCTTTCGCAAGCTGATCCAGATCGTGTTCGGCCTGTCCAT
CGCGTTCGCGGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCGGTCGTATGA

Upstream 100 bases:

>100_bases
CGGATGCACTGGACACGCCGTTTCCCGAGCTGCCGCCGCTTCCCGATGCCGCACCCGCTGCGGCGACTTTCCCATCCCCT
GACTCACTTGGAGAACTGCC

Downstream 100 bases:

>100_bases
GTGCCCCGGACACCTTCGCGGACGGTTTCGAGGTGCCGCTGCATCGCTCGCTGACCGAGCCGATTCTGCTGGGCGGTGCG
CCGCGCACCGTGGCGATCGC

Product: mating pair formation conjugal transfer TrbC transmembrane protein

Products: NA

Alternate protein names: Conjugal Transfer Protein Trbc; Conjugal Transfer Protein; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTQMTIPAFRFSANPALRLARLRCLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIII
ATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Sequences:

>Translated_127_residues
MTQMTIPAFRFSANPALRLARLRCLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIII
ATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV
>Mature_126_residues
TQMTIPAFRFSANPALRLARLRCLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIA
TGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13189; Mature: 13058

Theoretical pI: Translated: 12.11; Mature: 12.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQMTIPAFRFSANPALRLARLRCLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQ
CCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHH
SILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFS
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSGGAVV
CCCCCCC
>Mature Secondary Structure 
TQMTIPAFRFSANPALRLARLRCLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQ
CCCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHH
SILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFS
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSGGAVV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA