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The map label for this gene is hoxX [H]

Identifier: 94310483

GI number: 94310483

Start: 1661889

End: 1663628

Strand: Direct

Name: hoxX [H]

Synonym: Rmet_1541

Alternate gene names: 94310483

Gene position: 1661889-1663628 (Clockwise)

Preceding gene: 94310482

Following gene: 94310484

Centisome position: 42.31

GC content: 69.14

Gene sequence:

>1740_bases
ATGCGAATACTCTTCCTCACCCACAGCTTCAACAACCTCACCCAGCGCCTCTACGTGGAACTCACCGGGCGCGGGCACGA
GGTGTCCATCGAGTTCGACATCGCCGACAGCGTGGCCGAGGAGGCCGTCGCGCTGTTCCGGCCGGATCTCATCGTGGCGC
CCTATCTGCGCCGGGCGATACCCGAGTCCATCTGGCGCCAGCACGTTTGCCTGGTGGTGCATCCGGGCATCGTCGGCGAT
CGCGGTCCCTCGGCGCTGGACTGGACGATCCAGGAGGGTGTGGATGAGTGGGGCGTCACGGTGCTGCAGGCCAACGGCGA
GATGGATGCCGGCGACATCTGGGCCACCGAGACCTTTCCCATGTGCCTGGCGAAGAAGAGCAGCCTCTACCGCAACGAGG
TGACGGCGGCGGCGACCCGCGCGGTGCTGGCGGCGGTCGGGCGCTACGCCGTGTATCGTTCCGGCGCATTCCGCCCGCGG
CCGCTGGACTATGCGGATCCAAACGTGCGCGGCCGGCTGCGTCCGCTCATGAAGCAGGAAGACCGTAGCATCGACTGGCA
GCGCGAGAGCACCGAGCAGGTGTTGCGCAAGCTCCACGCGGCGGACGGTTTCCCCGGCGTGCGCGACGAACTGTTCGGCG
TGCCCTGTCATCTCTTCGACGCCCATGCGGAGTACCGCCTGCGGGGCGAGCCGGGCGCGCTGCTGGGGCGGCGTGAGGGT
GCAGTGCTGCGCGCCACGGTGGATGGCGCGGTGTGGATCGGCCATGCGAAGCGCGCCGACCGCGATGATGCGCTGAAGCT
GCCTGCCACCCTGGCCTTCGCCGAGGAGACGAAGGATCTGCCCGAGTACACCGTGCCCCTGTGGCGCGAAGAGGAGGGAG
ACTGGAGCCCGCTGCGCTACCATGAGGCCGGCGGCGTCGGCTACCTGCATTTCGATTTCTACAACGGCGCCATGGGCACG
ACGCAATGCCAGCGCCTGCTCGCCGCCTACGAGTTCGCGCGCAGCCGGTCCACGAAGGTCATCGTGCTCCTGGGCGGTGC
GGACTTCTGGTCCAACGGGATCCACCTCAATCTCATCGAGGCGGCGGACAGCGCCGCCGATGAGTCCTGGCGCAACATCA
ACGCCATCGACGACGTGGCCCGTGCCGTCATCGAGACCGGCGGCCAGCTCACCGTCGCCGCGCTGCGCGGCAACGCCGGC
GCCGGCGGCGCCTTCCTGGCGCTGGCGGCGGACGAAGTGTGGGCGCGCGAGGCGGCGATCCTCAACCCCCACTACAAGAA
CATGGGTAACCTCTACGGCTCCGAGTACTGGACCTACCTGCTGCCCAGGCGGGTGGGCATGGCGCGCGCCCGCGCCATCA
TGCAGAACCGCCTGCCCCTCGGCGCCGCGGAAGCGGCGCGGGAAGGCGTGGTGGATGCCTGCCTGTCCGGCGACGTGGCG
GCCTTCACCGTGCAGGTGGTGGCCCGTGCCGAAGCGCTGGCCGCTGCGGTGGACCTGGCACAGCGGCTCGAGGAGAAGCG
CGCGCGGCGCGTGCGCGACGAGGCCGTGAAGCCGCTGGCCGCCTATCGCGACGAAGAGCTGGAACACATGCGGCGCAACT
TCTACGGCTTCGATCCCAGCTATCACGTGGCGCGCTATCATTTCGTGCGCCGCACGCCGCACTCGTGGACGCCGCGGCAT
CTGGCCGCACACCGCGACATCGATTGGGGGACAGGCCGCCTGAAGGCCGTGAAGCCATGA

Upstream 100 bases:

>100_bases
GAGAGGTTGATTTTGAAACGCAGAGACGCCGAGACGCGGAGGAATTCAGAACAGGTTTTCTCGGCGCCTCGGCGCCTCGG
CGTTTAATGCAGCGTGATTC

Downstream 100 bases:

>100_bases
CGACAAAAACCAGGTTGCCCACCGTGCTGGTGGTGGATGACGAGGTGCGCTCCCAAGAGGCGCTGCGCCGCACGCTGGAG
GAGGAATTCGAGGTGCTCAC

Product: hydrogenase maturation factor hoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 579

Protein sequence:

>579_residues
MRILFLTHSFNNLTQRLYVELTGRGHEVSIEFDIADSVAEEAVALFRPDLIVAPYLRRAIPESIWRQHVCLVVHPGIVGD
RGPSALDWTIQEGVDEWGVTVLQANGEMDAGDIWATETFPMCLAKKSSLYRNEVTAAATRAVLAAVGRYAVYRSGAFRPR
PLDYADPNVRGRLRPLMKQEDRSIDWQRESTEQVLRKLHAADGFPGVRDELFGVPCHLFDAHAEYRLRGEPGALLGRREG
AVLRATVDGAVWIGHAKRADRDDALKLPATLAFAEETKDLPEYTVPLWREEEGDWSPLRYHEAGGVGYLHFDFYNGAMGT
TQCQRLLAAYEFARSRSTKVIVLLGGADFWSNGIHLNLIEAADSAADESWRNINAIDDVARAVIETGGQLTVAALRGNAG
AGGAFLALAADEVWAREAAILNPHYKNMGNLYGSEYWTYLLPRRVGMARARAIMQNRLPLGAAEAAREGVVDACLSGDVA
AFTVQVVARAEALAAAVDLAQRLEEKRARRVRDEAVKPLAAYRDEELEHMRRNFYGFDPSYHVARYHFVRRTPHSWTPRH
LAAHRDIDWGTGRLKAVKP

Sequences:

>Translated_579_residues
MRILFLTHSFNNLTQRLYVELTGRGHEVSIEFDIADSVAEEAVALFRPDLIVAPYLRRAIPESIWRQHVCLVVHPGIVGD
RGPSALDWTIQEGVDEWGVTVLQANGEMDAGDIWATETFPMCLAKKSSLYRNEVTAAATRAVLAAVGRYAVYRSGAFRPR
PLDYADPNVRGRLRPLMKQEDRSIDWQRESTEQVLRKLHAADGFPGVRDELFGVPCHLFDAHAEYRLRGEPGALLGRREG
AVLRATVDGAVWIGHAKRADRDDALKLPATLAFAEETKDLPEYTVPLWREEEGDWSPLRYHEAGGVGYLHFDFYNGAMGT
TQCQRLLAAYEFARSRSTKVIVLLGGADFWSNGIHLNLIEAADSAADESWRNINAIDDVARAVIETGGQLTVAALRGNAG
AGGAFLALAADEVWAREAAILNPHYKNMGNLYGSEYWTYLLPRRVGMARARAIMQNRLPLGAAEAAREGVVDACLSGDVA
AFTVQVVARAEALAAAVDLAQRLEEKRARRVRDEAVKPLAAYRDEELEHMRRNFYGFDPSYHVARYHFVRRTPHSWTPRH
LAAHRDIDWGTGRLKAVKP
>Mature_579_residues
MRILFLTHSFNNLTQRLYVELTGRGHEVSIEFDIADSVAEEAVALFRPDLIVAPYLRRAIPESIWRQHVCLVVHPGIVGD
RGPSALDWTIQEGVDEWGVTVLQANGEMDAGDIWATETFPMCLAKKSSLYRNEVTAAATRAVLAAVGRYAVYRSGAFRPR
PLDYADPNVRGRLRPLMKQEDRSIDWQRESTEQVLRKLHAADGFPGVRDELFGVPCHLFDAHAEYRLRGEPGALLGRREG
AVLRATVDGAVWIGHAKRADRDDALKLPATLAFAEETKDLPEYTVPLWREEEGDWSPLRYHEAGGVGYLHFDFYNGAMGT
TQCQRLLAAYEFARSRSTKVIVLLGGADFWSNGIHLNLIEAADSAADESWRNINAIDDVARAVIETGGQLTVAALRGNAG
AGGAFLALAADEVWAREAAILNPHYKNMGNLYGSEYWTYLLPRRVGMARARAIMQNRLPLGAAEAAREGVVDACLSGDVA
AFTVQVVARAEALAAAVDLAQRLEEKRARRVRDEAVKPLAAYRDEELEHMRRNFYGFDPSYHVARYHFVRRTPHSWTPRH
LAAHRDIDWGTGRLKAVKP

Specific function: Involved in the post-translational processing of the hydrogenase large subunit [H]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001753
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR015518
- InterPro:   IPR009188 [H]

Pfam domain/function: PF00378 ECH; PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: NA

Molecular weight: Translated: 64529; Mature: 64529

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFLTHSFNNLTQRLYVELTGRGHEVSIEFDIADSVAEEAVALFRPDLIVAPYLRRAI
CEEEEEECCHHHHCEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHH
PESIWRQHVCLVVHPGIVGDRGPSALDWTIQEGVDEWGVTVLQANGEMDAGDIWATETFP
HHHHHHCCEEEEECCCCCCCCCCCCEEHHHHHCCHHHCEEEEEECCCCCCCCEEECCCHH
MCLAKKSSLYRNEVTAAATRAVLAAVGRYAVYRSGAFRPRPLDYADPNVRGRLRPLMKQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC
DRSIDWQRESTEQVLRKLHAADGFPGVRDELFGVPCHLFDAHAEYRLRGEPGALLGRREG
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCEEEECCCCCEEECCCC
AVLRATVDGAVWIGHAKRADRDDALKLPATLAFAEETKDLPEYTVPLWREEEGDWSPLRY
CEEEEEECCEEEECCCCCCCCCCCEECCHHEEEHHHHCCCCCCCCCCEECCCCCCCCEEE
HEAGGVGYLHFDFYNGAMGTTQCQRLLAAYEFARSRSTKVIVLLGGADFWSNGIHLNLIE
ECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCEEEEEEE
AADSAADESWRNINAIDDVARAVIETGGQLTVAALRGNAGAGGAFLALAADEVWAREAAI
CCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHH
LNPHYKNMGNLYGSEYWTYLLPRRVGMARARAIMQNRLPLGAAEAAREGVVDACLSGDVA
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
AFTVQVVARAEALAAAVDLAQRLEEKRARRVRDEAVKPLAAYRDEELEHMRRNFYGFDPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
YHVARYHFVRRTPHSWTPRHLAAHRDIDWGTGRLKAVKP
HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEECCC
>Mature Secondary Structure
MRILFLTHSFNNLTQRLYVELTGRGHEVSIEFDIADSVAEEAVALFRPDLIVAPYLRRAI
CEEEEEECCHHHHCEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHH
PESIWRQHVCLVVHPGIVGDRGPSALDWTIQEGVDEWGVTVLQANGEMDAGDIWATETFP
HHHHHHCCEEEEECCCCCCCCCCCCEEHHHHHCCHHHCEEEEEECCCCCCCCEEECCCHH
MCLAKKSSLYRNEVTAAATRAVLAAVGRYAVYRSGAFRPRPLDYADPNVRGRLRPLMKQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHC
DRSIDWQRESTEQVLRKLHAADGFPGVRDELFGVPCHLFDAHAEYRLRGEPGALLGRREG
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCCEEEECCCCCEEECCCC
AVLRATVDGAVWIGHAKRADRDDALKLPATLAFAEETKDLPEYTVPLWREEEGDWSPLRY
CEEEEEECCEEEECCCCCCCCCCCEECCHHEEEHHHHCCCCCCCCCCEECCCCCCCCEEE
HEAGGVGYLHFDFYNGAMGTTQCQRLLAAYEFARSRSTKVIVLLGGADFWSNGIHLNLIE
ECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHCCCEEEEEEE
AADSAADESWRNINAIDDVARAVIETGGQLTVAALRGNAGAGGAFLALAADEVWAREAAI
CCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHH
LNPHYKNMGNLYGSEYWTYLLPRRVGMARARAIMQNRLPLGAAEAAREGVVDACLSGDVA
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
AFTVQVVARAEALAAAVDLAQRLEEKRARRVRDEAVKPLAAYRDEELEHMRRNFYGFDPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC
YHVARYHFVRRTPHSWTPRHLAAHRDIDWGTGRLKAVKP
HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8510650; 12597275 [H]