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The map label for this gene is hypC2 [H]

Identifier: 94310480

GI number: 94310480

Start: 1659340

End: 1659528

Strand: Direct

Name: hypC2 [H]

Synonym: Rmet_1538

Alternate gene names: 94310480

Gene position: 1659340-1659528 (Clockwise)

Preceding gene: 94310479

Following gene: 94310481

Centisome position: 42.24

GC content: 65.08

Gene sequence:

>189_bases
ATGGCCCTCATCGACCTGGGCGGCGTGCGCAAGGAGATCTCGCTGGCGCTGGTGGATGACGTCGCCGTGGGCGACTACGT
CATCGTGCACGTGGGCTACGCACTGACGAAGCTGGATCCCGAAGAGGCGGAACGCACCCTGAAGCTGTTCGCCGAAGCCG
GCATGGTGCAGACGGAGGGTGCGTCATGA

Upstream 100 bases:

>100_bases
CAGGCCTGGGTGGCGCTGCGGTGGGCGCCTCAACTTATGGAAGAGTAGAAACATGTGCCTTGCTATACCCGCACGCATCG
CGGAGAAACTCGACAACGAC

Downstream 100 bases:

>100_bases
AATACGTGGACGAATTCCGGGACGGCGAGCTGGCCCGTACCCTGGCGGCGAAGATCGCCCGCGACGCCGACTCCGGGCGC
AGCTACAGTTTCATGGAGTT

Product: hydrogenase expression/formation protein HypC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MALIDLGGVRKEISLALVDDVAVGDYVIVHVGYALTKLDPEEAERTLKLFAEAGMVQTEGAS

Sequences:

>Translated_62_residues
MALIDLGGVRKEISLALVDDVAVGDYVIVHVGYALTKLDPEEAERTLKLFAEAGMVQTEGAS
>Mature_61_residues
ALIDLGGVRKEISLALVDDVAVGDYVIVHVGYALTKLDPEEAERTLKLFAEAGMVQTEGAS

Specific function: Unknown

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 6590; Mature: 6458

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIDLGGVRKEISLALVDDVAVGDYVIVHVGYALTKLDPEEAERTLKLFAEAGMVQTEG
CEEECCCCCCHHHEEEEECCCCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHCCCEEECC
AS
CC
>Mature Secondary Structure 
ALIDLGGVRKEISLALVDDVAVGDYVIVHVGYALTKLDPEEAERTLKLFAEAGMVQTEG
EEECCCCCCHHHEEEEECCCCCCCEEEEEECHHHCCCCHHHHHHHHHHHHHCCCEEECC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8352644; 12948488 [H]