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The map label for this gene is cbbI1 [H]

Identifier: 94310463

GI number: 94310463

Start: 1643232

End: 1643891

Strand: Direct

Name: cbbI1 [H]

Synonym: Rmet_1521

Alternate gene names: 94310463

Gene position: 1643232-1643891 (Clockwise)

Preceding gene: 94310462

Following gene: 94310464

Centisome position: 41.83

GC content: 68.64

Gene sequence:

>660_bases
ATGACGCAGGACGAGATCAAGGCCATGGTCGCCCGTGCGGCGCTGCCGCACGTGCTGCCCGGCAGCATCATCGGCGTGGG
TACCGGATCGACGGTGAACCACTTCATCGACGCGCTGTCCTCGCTTCGCGAGGGCATCGCCGGCGCGGTGTCGAGCAGCA
ATGCGACCACGGCCAGGCTGCGCGGGCATGGCATTCGAGTCCTCGAGGCCGGCGAAGTCGAACAACTGGCTCTGTACGTG
GATGGCGCCGACGAGATCGACCCGCACGGTCACATGATCAAGGGTGGCGGTGCGGCGCTCACGCGCGAGAAGATCGTGGC
CGACTTGGCGCAGCGCTTCCTGTGCATCGCCGACGCATCCAAGAAAGTCGAGGTGCTGGGACGGTTCCCGCTACCCGTCG
AGGTGATCGACGTCGCCGCCACGCGCATCGCCCGCCGCTTCGCGGCGATCGGCGGCCGTGCCGTTCTGCGCAAGGGTGTC
GTCACCGACAACGGCCACCCGATCCTCGACGTGCACGGCCTTGCCATCGCCGACCCGCCGGCGTTGGAGGCCGAGATCAA
CCAGTGGCCCGGCGTGGTGACGGTCGGACTGTTCGCGCGCCACCGCGCCCATGCGTGCCTGCTGGGCACCCCCGAGGGTG
TGCTCACGCTGCAGTTCTGA

Upstream 100 bases:

>100_bases
CCGACATCGATGGCGGCCTGTTGGGCGGGGCGTCGCTGAACGTCGACGAGTTCATGGCCGTGGCCATCACGGCCCAGCGG
CTCGCGCAGGAGAACACTTA

Downstream 100 bases:

>100_bases
CTGCGTTAGAGATATGCGATCGTAATGCTCACGATTCGCTCATTGCAAGATCAGCGAAAAAGGGGCGACAATGCTAGCAG
CGGGCGCCAGACCCTGAATC

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTQDEIKAMVARAALPHVLPGSIIGVGTGSTVNHFIDALSSLREGIAGAVSSSNATTARLRGHGIRVLEAGEVEQLALYV
DGADEIDPHGHMIKGGGAALTREKIVADLAQRFLCIADASKKVEVLGRFPLPVEVIDVAATRIARRFAAIGGRAVLRKGV
VTDNGHPILDVHGLAIADPPALEAEINQWPGVVTVGLFARHRAHACLLGTPEGVLTLQF

Sequences:

>Translated_219_residues
MTQDEIKAMVARAALPHVLPGSIIGVGTGSTVNHFIDALSSLREGIAGAVSSSNATTARLRGHGIRVLEAGEVEQLALYV
DGADEIDPHGHMIKGGGAALTREKIVADLAQRFLCIADASKKVEVLGRFPLPVEVIDVAATRIARRFAAIGGRAVLRKGV
VTDNGHPILDVHGLAIADPPALEAEINQWPGVVTVGLFARHRAHACLLGTPEGVLTLQF
>Mature_218_residues
TQDEIKAMVARAALPHVLPGSIIGVGTGSTVNHFIDALSSLREGIAGAVSSSNATTARLRGHGIRVLEAGEVEQLALYVD
GADEIDPHGHMIKGGGAALTREKIVADLAQRFLCIADASKKVEVLGRFPLPVEVIDVAATRIARRFAAIGGRAVLRKGVV
TDNGHPILDVHGLAIADPPALEAEINQWPGVVTVGLFARHRAHACLLGTPEGVLTLQF

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=229, Percent_Identity=32.7510917030568, Blast_Score=96, Evalue=3e-20,
Organism=Escherichia coli, GI1789280, Length=217, Percent_Identity=60.8294930875576, Blast_Score=267, Evalue=5e-73,
Organism=Caenorhabditis elegans, GI17551758, Length=200, Percent_Identity=36.5, Blast_Score=93, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6324669, Length=162, Percent_Identity=34.5679012345679, Blast_Score=75, Evalue=5e-15,
Organism=Drosophila melanogaster, GI281364072, Length=214, Percent_Identity=31.7757009345794, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 22943; Mature: 22812

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDEIKAMVARAALPHVLPGSIIGVGTGSTVNHFIDALSSLREGIAGAVSSSNATTARL
CCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
RGHGIRVLEAGEVEQLALYVDGADEIDPHGHMIKGGGAALTREKIVADLAQRFLCIADAS
CCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC
KKVEVLGRFPLPVEVIDVAATRIARRFAAIGGRAVLRKGVVTDNGHPILDVHGLAIADPP
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCEEECCCC
ALEAEINQWPGVVTVGLFARHRAHACLLGTPEGVLTLQF
CCCHHHHCCCCEEEEHHHHHHCCCEEEEECCCCEEEEEC
>Mature Secondary Structure 
TQDEIKAMVARAALPHVLPGSIIGVGTGSTVNHFIDALSSLREGIAGAVSSSNATTARL
CHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
RGHGIRVLEAGEVEQLALYVDGADEIDPHGHMIKGGGAALTREKIVADLAQRFLCIADAS
CCCCEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCC
KKVEVLGRFPLPVEVIDVAATRIARRFAAIGGRAVLRKGVVTDNGHPILDVHGLAIADPP
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEEEECCEEECCCC
ALEAEINQWPGVVTVGLFARHRAHACLLGTPEGVLTLQF
CCCHHHHCCCCEEEEHHHHHHCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA