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The map label for this gene is yupB [H]

Identifier: 94310419

GI number: 94310419

Start: 1596748

End: 1597578

Strand: Direct

Name: yupB [H]

Synonym: Rmet_1477

Alternate gene names: 94310419

Gene position: 1596748-1597578 (Clockwise)

Preceding gene: 94310417

Following gene: 94310420

Centisome position: 40.65

GC content: 62.82

Gene sequence:

>831_bases
ATGCAACTCGCATCCCGTTTCGCTTCCCGTTCCCCCTCGCTGCGCAGCGATTACCCGCTGTCCGATGACCAGATTCGCAG
GGTGGCCCCGTCCATCTTCGCCGATGCACCGCATGAGAGCCGTTCCGAGCGGTACAGCTATATCCCCACCGCCGCCGTGC
TGACCGAGCTTCGCAAAGAAGGCTTCCAGCCCTTCATGGTGACGCAGACCCGCGTGCGCGATGAAGGCAAGCGCGAGCAC
ACCAAACACATGCTGCGCCTGCGCCATGCCAGTCAGATCAATGGCGCAGAGGCTAACGAAATCGTGCTGCTGAACTCGCA
CGACGGCACGAGCAGCTATCAGATGCTGGCCGGAATGTTCCGCTTCGTGTGCAGCAATGGCCTTGTATGCGGCGACACCG
TGGCCGATGTGCGCGTACCCCACAAAGGCGACGTGGCCGGTTCCGTCATCGAAGGCGCTTTCGAGGTGTTGAGCGGCTTC
GAGCGGGTGAAGGAATCTCGCGATGCCATGCGCGCGATCACGCTGGATGAAGGCGAAGCCGAAGTGTTCGCCCGTTCCGC
GCTGGCCCTCAAGTACGACCCCACGAACAACAAGCCCGCGCCCATCACCGAATCGCAAATCCTGATGCCGCGTCGGTTCG
ATGACAGCCGCCCCGACCTGTGGAGCGTGTTCAACCGCACGCAGGAGAACTTGACCAAGGGCGGATTGCATGGCCGCAGC
GCCAACGGACGTCGCCAGCAGACCCGACCCGTGCAGGGCATTGATTCCGATGTGCGCCTCAATCGCGCCCTCTGGATGCT
GGCCGATGGCCTGCGCCAGTTGAAAGCCTGA

Upstream 100 bases:

>100_bases
TCCTCGTGCCGACCGCACCGAACAGCCGAAAGGCTGGGCTCCGAATCTAGGAATCCGGTGTGCGGTTTTCTTCAACAGCC
TTTTTGTTCAGGAGAAAGAC

Downstream 100 bases:

>100_bases
ACCGTCCCCCCGCCGGAGGGGCGGTTCCCCTCCATCCCTTGTTTCACTCGATTGGAGATTCACCATGAACACCGTTACCC
AAACCGAAGCCCGCGCCGTC

Product: F plasmid protein 32-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MQLASRFASRSPSLRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTAAVLTELRKEGFQPFMVTQTRVRDEGKREH
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAFEVLSGF
ERVKESRDAMRAITLDEGEAEVFARSALALKYDPTNNKPAPITESQILMPRRFDDSRPDLWSVFNRTQENLTKGGLHGRS
ANGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA

Sequences:

>Translated_276_residues
MQLASRFASRSPSLRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTAAVLTELRKEGFQPFMVTQTRVRDEGKREH
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAFEVLSGF
ERVKESRDAMRAITLDEGEAEVFARSALALKYDPTNNKPAPITESQILMPRRFDDSRPDLWSVFNRTQENLTKGGLHGRS
ANGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA
>Mature_276_residues
MQLASRFASRSPSLRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTAAVLTELRKEGFQPFMVTQTRVRDEGKREH
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAFEVLSGF
ERVKESRDAMRAITLDEGEAEVFARSALALKYDPTNNKPAPITESQILMPRRFDDSRPDLWSVFNRTQENLTKGGLHGRS
ANGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=270, Percent_Identity=57.7777777777778, Blast_Score=323, Evalue=5e-90,
Organism=Escherichia coli, GI87081705, Length=270, Percent_Identity=57.4074074074074, Blast_Score=315, Evalue=3e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 30928; Mature: 30928

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLASRFASRSPSLRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTAAVLTELRKE
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHC
GFQPFMVTQTRVRDEGKREHTKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMF
CCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAFEVLSGFERVKESRDAMRAITLDEGEA
HHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
EVFARSALALKYDPTNNKPAPITESQILMPRRFDDSRPDLWSVFNRTQENLTKGGLHGRS
HHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
ANGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA
CCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLASRFASRSPSLRSDYPLSDDQIRRVAPSIFADAPHESRSERYSYIPTAAVLTELRKE
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHC
GFQPFMVTQTRVRDEGKREHTKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMF
CCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAFEVLSGFERVKESRDAMRAITLDEGEA
HHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
EVFARSALALKYDPTNNKPAPITESQILMPRRFDDSRPDLWSVFNRTQENLTKGGLHGRS
HHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
ANGRRQQTRPVQGIDSDVRLNRALWMLADGLRQLKA
CCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]