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The map label for this gene is parB [H]

Identifier: 94310420

GI number: 94310420

Start: 1597643

End: 1599685

Strand: Direct

Name: parB [H]

Synonym: Rmet_1478

Alternate gene names: 94310420

Gene position: 1597643-1599685 (Clockwise)

Preceding gene: 94310419

Following gene: 94310422

Centisome position: 40.67

GC content: 66.81

Gene sequence:

>2043_bases
ATGAACACCGTTACCCAAACCGAAGCCCGCGCCGTCAATACCATCGCCGCTATCCCGCTGGAAGCAGCCGACCCGACCAA
GAACCTGATTCTGGTTCCGCTGTCGCGGCTAGTGCTGCGCCCCACGGGCCGCAATGTCCGGAAGACCCCGCGCATGTCCA
TCCCCGAACTGGCCGCGAGCATCCAGCGCGTGGGCTTGCTGCAAAACCTGATCGTGATTGCATCCGCCGATGGCGAGCAT
TACGAAGTCGTGGCCGGTGGCCGCAGGCTGGCCGCGTTGAAGCTGCTGGCGAAAAAGCACCGCATCAGCAAGGAATGGGA
AGTGCCTTGCCTACTGGTGGCCGATGGCACCGCCCGCACGGCCAGCCTCACCGAGAACGTGCAGCGCGAAGCCATGCACC
CGGCAGACCAGTTCGAGGCATTCGCCGCGCTGGTGGCCGAAGGTCGGCCCATCGAGGACATTGCAGCGGATTTCAGCGTC
ACGCCACTGGTGGTGCAGCGCCGCTTGAAGCTGGCGAATGTCTCGCCGCGCCTGATGGCCGACTATCGTGCCGATGCCGT
GAGCCTTGACCAGTTGATGGCCCTTGCCATCACCGACGATCACGCCGCGCAAGAAGCCGCTTTCTACGACGCACCAACAT
GGCAGCGCCAGCCGTCCGCGCTGCGCGAACGCCTCACCGAGCGCGAAATCGACGCCTACCGGCATCCGCTGGTGCGATTC
GTCGGGCTGGACACCTACGAAGCCGCAGGCGGTGGCGTGCGCCGTGACCTGTTCGCGGAAGGTGACGCGGGCGTGTATCT
GACCGATGCCGCGCTGTTGGACAGGCTGGCGCAAGACCGGCTGGCGGGCATCGCCGCCACCGTCCGCGCCGAGGGCTGGG
CGTGGGTGGATGCCACGCCGGGCGTGACCCATGCCGACCTGCACGCCTTCCAGCGTGCGCCGAGGGAACGGCGCGAGCCA
AACAAGCGGGAAGCGCAACGCATTGAGAAGTTGCAAGCCCGGATGCACCAACTGGCCGAAGCCGTGGACGCCGCGATGGA
CGCCGATGACGAGGAAAAGGCCGACGCCCTGCAGGAGGAAGGCGAAACCGTGGGCGAGCAGTTGCAGGCGTTGGAAGATG
GCTTGCAGGACTACGGCCAGACCGTGAAGGCCGCAGCCGGTGCCATCGTCACCATCGACCGCAACGGGCAGGCCGTCATT
CATCGCGGCCTGATGCGCGAAGCCGAAGCCAAGGCGCTGCGCACGCTGGAAAAGCTCCGGCAGGGTTTCAGCGACAGTGA
TACCGCCAACGATGACGAAGGCGAGGAAGGCGAAGCGCCCAAGGCCGCAGCGATTTCCGACCGGCTGGCCCAGCGTCTGA
GCGCCCATCGCACTGCCGCGCTGCAAATCGAAGTCGCCCGGCATCCGCATGTCGCGCTGGCCGCGCTGGTGCATGGCATG
GTGCAGACCGTCTTGCAGGGACGTCGCTACGGCAACGATCTGCCGCTGGGCGTGCGCTTGGCGGTACAAGACCGACTGGA
AGGCATGGCCCCGGACTGGCCGGAATCGCCTGCCGCCGTGGCGCTGCGCGAACTGGAACAGGTGGCAGGCGTTGCCTTGC
CGGAGGAAAGCGCCGAGCTGTTCGCCGCGCTGCTGGCGAAGTCGCAAGACGAACTGGTGCGACTGCTCGCCGTGTGCGTG
GCTTCCACGGTGGACGTGGTGACGCCTCGTGCCACGCCACACCAGCCCGGCGTGGAACTGGCGCAGGCCGTGGGCCTCGA
CATGGCCGCATGGTGGAAGCCGACCGCAGAAGGCTACTTCAAGCACGTTTCCAAGGCCGTGATTCTGGATGCCGTGGGCG
CGTTTGCACCGGAATCCGTCACCCGGCTGGCGAAGCTCAAGAAGGCCGACATTGCCAGCGAAGCCGAACGGCTGGCGGAC
GGCTCGGGCTGGATGCCTGCCATCTTCAAGGCCGCAGGCCCGCAGGAGGCAGGCCCGGAGCAGGGCGCCCCGGAGGATGC
TGAAGCAATGGCGGATGAACCCGCCGAGGCGCTGGCCGCTTGA

Upstream 100 bases:

>100_bases
ATGCTGGCCGATGGCCTGCGCCAGTTGAAAGCCTGAACCGTCCCCCCGCCGGAGGGGCGGTTCCCCTCCATCCCTTGTTT
CACTCGATTGGAGATTCACC

Downstream 100 bases:

>100_bases
CCGGCGCCGAAGGCAAGCGCCCCGGCTTAGACCGGGGCGCTTTGCTATTGGTGCGGCTCCATACCGGAAACGCCAAAAAT
CCGGGCGCGGCGGTAGCCGC

Product: ParB nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MNTVTQTEARAVNTIAAIPLEAADPTKNLILVPLSRLVLRPTGRNVRKTPRMSIPELAASIQRVGLLQNLIVIASADGEH
YEVVAGGRRLAALKLLAKKHRISKEWEVPCLLVADGTARTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADFSV
TPLVVQRRLKLANVSPRLMADYRADAVSLDQLMALAITDDHAAQEAAFYDAPTWQRQPSALRERLTEREIDAYRHPLVRF
VGLDTYEAAGGGVRRDLFAEGDAGVYLTDAALLDRLAQDRLAGIAATVRAEGWAWVDATPGVTHADLHAFQRAPRERREP
NKREAQRIEKLQARMHQLAEAVDAAMDADDEEKADALQEEGETVGEQLQALEDGLQDYGQTVKAAAGAIVTIDRNGQAVI
HRGLMREAEAKALRTLEKLRQGFSDSDTANDDEGEEGEAPKAAAISDRLAQRLSAHRTAALQIEVARHPHVALAALVHGM
VQTVLQGRRYGNDLPLGVRLAVQDRLEGMAPDWPESPAAVALRELEQVAGVALPEESAELFAALLAKSQDELVRLLAVCV
ASTVDVVTPRATPHQPGVELAQAVGLDMAAWWKPTAEGYFKHVSKAVILDAVGAFAPESVTRLAKLKKADIASEAERLAD
GSGWMPAIFKAAGPQEAGPEQGAPEDAEAMADEPAEALAA

Sequences:

>Translated_680_residues
MNTVTQTEARAVNTIAAIPLEAADPTKNLILVPLSRLVLRPTGRNVRKTPRMSIPELAASIQRVGLLQNLIVIASADGEH
YEVVAGGRRLAALKLLAKKHRISKEWEVPCLLVADGTARTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADFSV
TPLVVQRRLKLANVSPRLMADYRADAVSLDQLMALAITDDHAAQEAAFYDAPTWQRQPSALRERLTEREIDAYRHPLVRF
VGLDTYEAAGGGVRRDLFAEGDAGVYLTDAALLDRLAQDRLAGIAATVRAEGWAWVDATPGVTHADLHAFQRAPRERREP
NKREAQRIEKLQARMHQLAEAVDAAMDADDEEKADALQEEGETVGEQLQALEDGLQDYGQTVKAAAGAIVTIDRNGQAVI
HRGLMREAEAKALRTLEKLRQGFSDSDTANDDEGEEGEAPKAAAISDRLAQRLSAHRTAALQIEVARHPHVALAALVHGM
VQTVLQGRRYGNDLPLGVRLAVQDRLEGMAPDWPESPAAVALRELEQVAGVALPEESAELFAALLAKSQDELVRLLAVCV
ASTVDVVTPRATPHQPGVELAQAVGLDMAAWWKPTAEGYFKHVSKAVILDAVGAFAPESVTRLAKLKKADIASEAERLAD
GSGWMPAIFKAAGPQEAGPEQGAPEDAEAMADEPAEALAA
>Mature_680_residues
MNTVTQTEARAVNTIAAIPLEAADPTKNLILVPLSRLVLRPTGRNVRKTPRMSIPELAASIQRVGLLQNLIVIASADGEH
YEVVAGGRRLAALKLLAKKHRISKEWEVPCLLVADGTARTASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADFSV
TPLVVQRRLKLANVSPRLMADYRADAVSLDQLMALAITDDHAAQEAAFYDAPTWQRQPSALRERLTEREIDAYRHPLVRF
VGLDTYEAAGGGVRRDLFAEGDAGVYLTDAALLDRLAQDRLAGIAATVRAEGWAWVDATPGVTHADLHAFQRAPRERREP
NKREAQRIEKLQARMHQLAEAVDAAMDADDEEKADALQEEGETVGEQLQALEDGLQDYGQTVKAAAGAIVTIDRNGQAVI
HRGLMREAEAKALRTLEKLRQGFSDSDTANDDEGEEGEAPKAAAISDRLAQRLSAHRTAALQIEVARHPHVALAALVHGM
VQTVLQGRRYGNDLPLGVRLAVQDRLEGMAPDWPESPAAVALRELEQVAGVALPEESAELFAALLAKSQDELVRLLAVCV
ASTVDVVTPRATPHQPGVELAQAVGLDMAAWWKPTAEGYFKHVSKAVILDAVGAFAPESVTRLAKLKKADIASEAERLAD
GSGWMPAIFKAAGPQEAGPEQGAPEDAEAMADEPAEALAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 73329; Mature: 73329

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVTQTEARAVNTIAAIPLEAADPTKNLILVPLSRLVLRPTGRNVRKTPRMSIPELAAS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCHHHHHHH
IQRVGLLQNLIVIASADGEHYEVVAGGRRLAALKLLAKKHRISKEWEVPCLLVADGTART
HHHHHHHHHEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
ASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADFSVTPLVVQRRLKLANVSPRLMA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
DYRADAVSLDQLMALAITDDHAAQEAAFYDAPTWQRQPSALRERLTEREIDAYRHPLVRF
HHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGLDTYEAAGGGVRRDLFAEGDAGVYLTDAALLDRLAQDRLAGIAATVRAEGWAWVDATP
HCCCCHHCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GVTHADLHAFQRAPRERREPNKREAQRIEKLQARMHQLAEAVDAAMDADDEEKADALQEE
CCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GETVGEQLQALEDGLQDYGQTVKAAAGAIVTIDRNGQAVIHRGLMREAEAKALRTLEKLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QGFSDSDTANDDEGEEGEAPKAAAISDRLAQRLSAHRTAALQIEVARHPHVALAALVHGM
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHH
VQTVLQGRRYGNDLPLGVRLAVQDRLEGMAPDWPESPAAVALRELEQVAGVALPEESAEL
HHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
FAALLAKSQDELVRLLAVCVASTVDVVTPRATPHQPGVELAQAVGLDMAAWWKPTAEGYF
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHH
KHVSKAVILDAVGAFAPESVTRLAKLKKADIASEAERLADGSGWMPAIFKAAGPQEAGPE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC
QGAPEDAEAMADEPAEALAA
CCCCCHHHHHHCCCHHHHCC
>Mature Secondary Structure
MNTVTQTEARAVNTIAAIPLEAADPTKNLILVPLSRLVLRPTGRNVRKTPRMSIPELAAS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCHHHHHHH
IQRVGLLQNLIVIASADGEHYEVVAGGRRLAALKLLAKKHRISKEWEVPCLLVADGTART
HHHHHHHHHEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
ASLTENVQREAMHPADQFEAFAALVAEGRPIEDIAADFSVTPLVVQRRLKLANVSPRLMA
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
DYRADAVSLDQLMALAITDDHAAQEAAFYDAPTWQRQPSALRERLTEREIDAYRHPLVRF
HHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGLDTYEAAGGGVRRDLFAEGDAGVYLTDAALLDRLAQDRLAGIAATVRAEGWAWVDATP
HCCCCHHCCCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
GVTHADLHAFQRAPRERREPNKREAQRIEKLQARMHQLAEAVDAAMDADDEEKADALQEE
CCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GETVGEQLQALEDGLQDYGQTVKAAAGAIVTIDRNGQAVIHRGLMREAEAKALRTLEKLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QGFSDSDTANDDEGEEGEAPKAAAISDRLAQRLSAHRTAALQIEVARHPHVALAALVHGM
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHH
VQTVLQGRRYGNDLPLGVRLAVQDRLEGMAPDWPESPAAVALRELEQVAGVALPEESAEL
HHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH
FAALLAKSQDELVRLLAVCVASTVDVVTPRATPHQPGVELAQAVGLDMAAWWKPTAEGYF
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHH
KHVSKAVILDAVGAFAPESVTRLAKLKKADIASEAERLADGSGWMPAIFKAAGPQEAGPE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC
QGAPEDAEAMADEPAEALAA
CCCCCHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]