Click here to switch to the map view.

The map label for this gene is yaeL [C]

Identifier: 94310384

GI number: 94310384

Start: 1562732

End: 1564123

Strand: Direct

Name: yaeL [C]

Synonym: Rmet_1442

Alternate gene names: 94310384

Gene position: 1562732-1564123 (Clockwise)

Preceding gene: 94310383

Following gene: 94310385

Centisome position: 39.78

GC content: 64.73

Gene sequence:

>1392_bases
ATGCAAACCGTAATTGCGTTCGTCGTCGCCCTCTGTATCCTGATCTTTGTGCACGAGATGGGGCACTACCTTGCCGCGCG
CGCTTGCGGCGTCAAGGTGCTGCGCTTCTCGATCGGCTTTGGCCGTCCGTTGGTGCGTTGGGTCGGCAAGGGCCGTGACA
AGACGGAGTGGACGCTGGCGGCAATTCCGCTGGGCGGCTACGTCAAGATGCTGGATGAGCGCGAGCGTGACCCGGAGACC
GATCCGCCGATCGATCCCGCGGAGTTGCCCCGTGCGTTCAATCGCCAGCCGGTAGGCAAGCGCTTTGTCGTCGTGGCCGC
CGGGCCGCTGGCGAATTTCTTGCTGGCCGTCGTGTTGTACGTGGTGCTGTTCGCGGGTGGGATGCGCGAGCCGGTGCCGG
TGGTGGCCGCGCCGGCCGCTGGGACGCTGGCGGCGCAGGCCGGCGTGCGGGACGGCGATCGCGTGCTGTCGCTGACCGCA
AACGATCATACTGAAGCCGTGCGCTCCTGGAATGATCTGCGCATGGCCGTGTTTTCCCAGGGTTTCGGGGATGCGCGGGC
GGTACTGCGGGTGCGTGGGATCGATGGGGCCGAGCGCGATGTTGCCTTGGCACGCCTTCCGAATACTGGCGGAGATCCGG
AGCAGGACCCGCTGGCCGTTCTGGGCCTGGCCCTCAAGGGCGGTCCGGTGACCATTACCGAGATCGTCCCCGATTCCGCG
GCGCAGCGCGCCGGGCTCAAGGCCGGCGACCGGGTAGTGGCATGGGATGGGCAGCCCCTCACACAGGCCAGCGCGCTGAT
TCGCGGTGTCCGTGCCCGTCCCGGGCAGGAGGTCACGCTAGGTATCGAGCGGGCAGGGGAACGTATTGACGTCAAGGCGA
AACTCGACGCGGCGCCAGCGCCCGAAGGCGAGGCCCGTGGAGGGTCTCAGGTCGGCAAGTTGGGGGCCGCGCTCAACCAG
TCCGTCCAGACAGAGATCGTCCGGTACCCGCTGGTACAGGCGGTGGCGCGGGCTGCGGACCAGGTTTGGAACACCAGCGC
GCTGTCGTTGAAACTGCTCGGCAAGATGCTGGTGGGGCAGGCGTCCCTGCAGAATTTGAGCGGGCCGCTGACCGTGGCTG
ACTATGCGGGACGCGCTGCGAACATGGGCTGGCAGCCATTTATCAGCTTTCTGGCATTGGTCAGTGTCAGCCTCGGCGTG
CTGAATTTGTTACCTATTCCGGTTCTGGATGGTGGGCATTTGCTGTATTATTGCGTGGAATTTTTGACTGGCAGGCCTGT
TCCAGACCATTGGCAAGCGATGCTGCAGAAGGTAGGCATCGCGTGCATCTTGCTCCTGACCTCACTCGCTTTGTTCAATG
ACGTCAGCCGACTGTTTCTGGCGCGCGGCTAA

Upstream 100 bases:

>100_bases
CCGATTCAGCAGCGCGTCGCGGCGCGCAGGCGCAGTTGGGAAGCCTGGCTGGCCGTTGAACCAGTCCGCCGTGGGCAGAT
TCTGAAAAGGGTGATTTGCC

Downstream 100 bases:

>100_bases
TTTCGCGTAGCCGGAGCCCAAGTTGGCAGGGGGCGATCGTATCCCAGGGGAAGAACCTCGTCGGGATCGGGCAGCCGTGC
CAGCATTGCCAGGCTTGGAG

Product: zinc metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MQTVIAFVVALCILIFVHEMGHYLAARACGVKVLRFSIGFGRPLVRWVGKGRDKTEWTLAAIPLGGYVKMLDERERDPET
DPPIDPAELPRAFNRQPVGKRFVVVAAGPLANFLLAVVLYVVLFAGGMREPVPVVAAPAAGTLAAQAGVRDGDRVLSLTA
NDHTEAVRSWNDLRMAVFSQGFGDARAVLRVRGIDGAERDVALARLPNTGGDPEQDPLAVLGLALKGGPVTITEIVPDSA
AQRAGLKAGDRVVAWDGQPLTQASALIRGVRARPGQEVTLGIERAGERIDVKAKLDAAPAPEGEARGGSQVGKLGAALNQ
SVQTEIVRYPLVQAVARAADQVWNTSALSLKLLGKMLVGQASLQNLSGPLTVADYAGRAANMGWQPFISFLALVSVSLGV
LNLLPIPVLDGGHLLYYCVEFLTGRPVPDHWQAMLQKVGIACILLLTSLALFNDVSRLFLARG

Sequences:

>Translated_463_residues
MQTVIAFVVALCILIFVHEMGHYLAARACGVKVLRFSIGFGRPLVRWVGKGRDKTEWTLAAIPLGGYVKMLDERERDPET
DPPIDPAELPRAFNRQPVGKRFVVVAAGPLANFLLAVVLYVVLFAGGMREPVPVVAAPAAGTLAAQAGVRDGDRVLSLTA
NDHTEAVRSWNDLRMAVFSQGFGDARAVLRVRGIDGAERDVALARLPNTGGDPEQDPLAVLGLALKGGPVTITEIVPDSA
AQRAGLKAGDRVVAWDGQPLTQASALIRGVRARPGQEVTLGIERAGERIDVKAKLDAAPAPEGEARGGSQVGKLGAALNQ
SVQTEIVRYPLVQAVARAADQVWNTSALSLKLLGKMLVGQASLQNLSGPLTVADYAGRAANMGWQPFISFLALVSVSLGV
LNLLPIPVLDGGHLLYYCVEFLTGRPVPDHWQAMLQKVGIACILLLTSLALFNDVSRLFLARG
>Mature_463_residues
MQTVIAFVVALCILIFVHEMGHYLAARACGVKVLRFSIGFGRPLVRWVGKGRDKTEWTLAAIPLGGYVKMLDERERDPET
DPPIDPAELPRAFNRQPVGKRFVVVAAGPLANFLLAVVLYVVLFAGGMREPVPVVAAPAAGTLAAQAGVRDGDRVLSLTA
NDHTEAVRSWNDLRMAVFSQGFGDARAVLRVRGIDGAERDVALARLPNTGGDPEQDPLAVLGLALKGGPVTITEIVPDSA
AQRAGLKAGDRVVAWDGQPLTQASALIRGVRARPGQEVTLGIERAGERIDVKAKLDAAPAPEGEARGGSQVGKLGAALNQ
SVQTEIVRYPLVQAVARAADQVWNTSALSLKLLGKMLVGQASLQNLSGPLTVADYAGRAANMGWQPFISFLALVSVSLGV
LNLLPIPVLDGGHLLYYCVEFLTGRPVPDHWQAMLQKVGIACILLLTSLALFNDVSRLFLARG

Specific function: Unknown

COG id: COG0750

COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1786373, Length=460, Percent_Identity=39.3478260869565, Blast_Score=285, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR004387
- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 49235; Mature: 49235

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTVIAFVVALCILIFVHEMGHYLAARACGVKVLRFSIGFGRPLVRWVGKGRDKTEWTLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCCCCEEEE
AIPLGGYVKMLDERERDPETDPPIDPAELPRAFNRQPVGKRFVVVAAGPLANFLLAVVLY
EECCCHHHHHHHHHCCCCCCCCCCCHHHHCHHHCCCCCCCEEEEEECCHHHHHHHHHHHH
VVLFAGGMREPVPVVAAPAAGTLAAQAGVRDGDRVLSLTANDHTEAVRSWNDLRMAVFSQ
HHHHCCCCCCCCCEEECCCCCHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC
GFGDARAVLRVRGIDGAERDVALARLPNTGGDPEQDPLAVLGLALKGGPVTITEIVPDSA
CCCCHHHEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCHH
AQRAGLKAGDRVVAWDGQPLTQASALIRGVRARPGQEVTLGIERAGERIDVKAKLDAAPA
HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHCCCEEEEEEECCCCCC
PEGEARGGSQVGKLGAALNQSVQTEIVRYPLVQAVARAADQVWNTSALSLKLLGKMLVGQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ASLQNLSGPLTVADYAGRAANMGWQPFISFLALVSVSLGVLNLLPIPVLDGGHLLYYCVE
HHHHHCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
FLTGRPVPDHWQAMLQKVGIACILLLTSLALFNDVSRLFLARG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTVIAFVVALCILIFVHEMGHYLAARACGVKVLRFSIGFGRPLVRWVGKGRDKTEWTLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCCCCEEEE
AIPLGGYVKMLDERERDPETDPPIDPAELPRAFNRQPVGKRFVVVAAGPLANFLLAVVLY
EECCCHHHHHHHHHCCCCCCCCCCCHHHHCHHHCCCCCCCEEEEEECCHHHHHHHHHHHH
VVLFAGGMREPVPVVAAPAAGTLAAQAGVRDGDRVLSLTANDHTEAVRSWNDLRMAVFSQ
HHHHCCCCCCCCCEEECCCCCHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC
GFGDARAVLRVRGIDGAERDVALARLPNTGGDPEQDPLAVLGLALKGGPVTITEIVPDSA
CCCCHHHEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHEEEECCCCEEEEEECCCHH
AQRAGLKAGDRVVAWDGQPLTQASALIRGVRARPGQEVTLGIERAGERIDVKAKLDAAPA
HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEHHHCCCEEEEEEECCCCCC
PEGEARGGSQVGKLGAALNQSVQTEIVRYPLVQAVARAADQVWNTSALSLKLLGKMLVGQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ASLQNLSGPLTVADYAGRAANMGWQPFISFLALVSVSLGVLNLLPIPVLDGGHLLYYCVE
HHHHHCCCCEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
FLTGRPVPDHWQAMLQKVGIACILLLTSLALFNDVSRLFLARG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]