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The map label for this gene is dppA1b [H]

Identifier: 94310350

GI number: 94310350

Start: 1520900

End: 1522456

Strand: Direct

Name: dppA1b [H]

Synonym: Rmet_1408

Alternate gene names: 94310350

Gene position: 1520900-1522456 (Clockwise)

Preceding gene: 94310349

Following gene: 94310351

Centisome position: 38.72

GC content: 63.52

Gene sequence:

>1557_bases
ATGTCTGACCGCAAGGTTTCGTTCCGCCTGATGGCCGGCGCCACCGCAGTGGGCGCCATGGGCATGATGGCCGCCGCGCC
GGCATTCGCCGCCAAGGACGCGGTGATGGCCGTGTACTCCACCTTCACCACGCTGGACCCGTACGACGCGAACGACACGT
TGTCGCAGGCGGCGGTGAAGTCGTTCTACCAGGGCCTGTTCGGCTTCGACAAGGACATGAAGCTGGTCAACGTGCTGGCC
GAGAGCTACGACGTCAGCAAGGATGGCCTGGTCTACACGATCAAGCTCAAGAAGGGCGTGAAATTCCACGACGGCACCAC
GTTCGACGCGACCGCGGTCAAGGCCAATCTGGACCGCGTGACCGATCCGGCCAACAAGCTCAAGCGCTACACGCTGTTCA
ACCGTGTGGCCAAGACCGACGTGGTGGACCCGAACACGGTGCGAATCACGCTCAAGGAGCCGTTCTCGCCGTTCATCAAC
GTGCTGGCCCACCCGTCGGCGGTGATGATCAGCCCGACCGCGCTGAAGAAGTACGGCAAGGAGATTGCCTTCCACCCCGT
GGGCACCGGACCGTTCGAGTTCGTGGAATGGAAGCAGACCGATTACCTGAAGGGCAAGAAGTTCGCGGGCTACTGGAAGA
CCGGCTATCCGAAGATCGACACGATCACCTGGAAGCCTGTGGTCGACAACAACACGCGCTCGGCCGTGATGCAGACCGGC
GAGGCCGACTTCGCGTTCAGCATTCCGTTCGAGCAGGCCGCGGTGCTCAAGGCCAGCCCGAAGGTGGACCTGATCGACGG
GCCGTCGATCATCCAGCGCTACCTGTCGCTGAACACGATGGTCAAGCCGTTCAACGACCCCAAGGTGCGCCAGGCGATCA
ACTACGCGATCAACAAGGAGGCGCTGGCCAAGGTGGCGTTCGCCGGCTACGCCGTACCGTCGGCCGGCGTGGTGCCACCG
GGCGTGGATTACGCCGAGAAGCTGGGCCCATGGCCGTACAACCCGGCCAAGGCGCGCGAGCTGCTCAAGGAAGCCGGCTA
CCCGAACGGCTTCGAGACGACGCTGTGGTCGGCCTATAACCACACCACCGCGCAGAAGGTGATCCAGTTCGTGCAGCAGC
AGCTGCAACAGGTGGGCATCAAGGCGCAGGTGCTGGCACTGGAAGCTGGCCAGCGCGTGGAACGCGTGGAGTCCGTGGCC
AAGCCCGAGGACGCCGGCGTGCGCATGTACTACGTGGGCTGGTCGTCGTCGACCGGTGAGTCGGACTGGGCGCTGCGTCC
GCTGCTGGCTTCGGAAGCGATGCCGCCGAAGCTGCTGAACACGGCCTACTACAAGAACGACCAGGTCGATGCCGATATCG
CCAACGCGCTGCGCACGACCGATCGCGCCGAGAAGGCCAAGCTCTACAAGGACGCCCAGGAACAAATCTGGAAGGACGCG
CCGTGGGCCTTCCTGGTGACCGAGAAGGTGCTGTACGCGCGTTCGAAGCGCCTGACTGGTGCCTACGTGATGCCCGACGG
CTCGTTCAACTTCGACGAGATCGATATCAAGCAGTAA

Upstream 100 bases:

>100_bases
CTGGTTGCCGTGGCCGGCAGTGGCGCGCACGGACATTACGTAGCCCGGCACGCCGTCGGCGGCGCCTACTGAAGTTCGTT
TTCCTCAAGGAGAAGTGAAG

Downstream 100 bases:

>100_bases
GCGGTTGACATGTCTTCGGTGTTTGCCCCTCTCCCATGCATGGTGAGAGGGGGAGTACCGCAGTAGAGCAGTAGAGCAGT
AGAGCAGTAAGAGTGGTTGC

Product: putative peptide transporter subunit: periplasmic-binding component of ABC superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MSDRKVSFRLMAGATAVGAMGMMAAAPAFAAKDAVMAVYSTFTTLDPYDANDTLSQAAVKSFYQGLFGFDKDMKLVNVLA
ESYDVSKDGLVYTIKLKKGVKFHDGTTFDATAVKANLDRVTDPANKLKRYTLFNRVAKTDVVDPNTVRITLKEPFSPFIN
VLAHPSAVMISPTALKKYGKEIAFHPVGTGPFEFVEWKQTDYLKGKKFAGYWKTGYPKIDTITWKPVVDNNTRSAVMQTG
EADFAFSIPFEQAAVLKASPKVDLIDGPSIIQRYLSLNTMVKPFNDPKVRQAINYAINKEALAKVAFAGYAVPSAGVVPP
GVDYAEKLGPWPYNPAKARELLKEAGYPNGFETTLWSAYNHTTAQKVIQFVQQQLQQVGIKAQVLALEAGQRVERVESVA
KPEDAGVRMYYVGWSSSTGESDWALRPLLASEAMPPKLLNTAYYKNDQVDADIANALRTTDRAEKAKLYKDAQEQIWKDA
PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDEIDIKQ

Sequences:

>Translated_518_residues
MSDRKVSFRLMAGATAVGAMGMMAAAPAFAAKDAVMAVYSTFTTLDPYDANDTLSQAAVKSFYQGLFGFDKDMKLVNVLA
ESYDVSKDGLVYTIKLKKGVKFHDGTTFDATAVKANLDRVTDPANKLKRYTLFNRVAKTDVVDPNTVRITLKEPFSPFIN
VLAHPSAVMISPTALKKYGKEIAFHPVGTGPFEFVEWKQTDYLKGKKFAGYWKTGYPKIDTITWKPVVDNNTRSAVMQTG
EADFAFSIPFEQAAVLKASPKVDLIDGPSIIQRYLSLNTMVKPFNDPKVRQAINYAINKEALAKVAFAGYAVPSAGVVPP
GVDYAEKLGPWPYNPAKARELLKEAGYPNGFETTLWSAYNHTTAQKVIQFVQQQLQQVGIKAQVLALEAGQRVERVESVA
KPEDAGVRMYYVGWSSSTGESDWALRPLLASEAMPPKLLNTAYYKNDQVDADIANALRTTDRAEKAKLYKDAQEQIWKDA
PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDEIDIKQ
>Mature_517_residues
SDRKVSFRLMAGATAVGAMGMMAAAPAFAAKDAVMAVYSTFTTLDPYDANDTLSQAAVKSFYQGLFGFDKDMKLVNVLAE
SYDVSKDGLVYTIKLKKGVKFHDGTTFDATAVKANLDRVTDPANKLKRYTLFNRVAKTDVVDPNTVRITLKEPFSPFINV
LAHPSAVMISPTALKKYGKEIAFHPVGTGPFEFVEWKQTDYLKGKKFAGYWKTGYPKIDTITWKPVVDNNTRSAVMQTGE
ADFAFSIPFEQAAVLKASPKVDLIDGPSIIQRYLSLNTMVKPFNDPKVRQAINYAINKEALAKVAFAGYAVPSAGVVPPG
VDYAEKLGPWPYNPAKARELLKEAGYPNGFETTLWSAYNHTTAQKVIQFVQQQLQQVGIKAQVLALEAGQRVERVESVAK
PEDAGVRMYYVGWSSSTGESDWALRPLLASEAMPPKLLNTAYYKNDQVDADIANALRTTDRAEKAKLYKDAQEQIWKDAP
WAFLVTEKVLYARSKRLTGAYVMPDGSFNFDEIDIKQ

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=506, Percent_Identity=64.0316205533597, Blast_Score=697, Evalue=0.0,
Organism=Escherichia coli, GI1789966, Length=470, Percent_Identity=29.5744680851064, Blast_Score=193, Evalue=3e-50,
Organism=Escherichia coli, GI1787495, Length=504, Percent_Identity=25.5952380952381, Blast_Score=138, Evalue=8e-34,
Organism=Escherichia coli, GI1787762, Length=533, Percent_Identity=27.2045028142589, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1789887, Length=506, Percent_Identity=26.2845849802372, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1787551, Length=538, Percent_Identity=26.2081784386617, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1789397, Length=499, Percent_Identity=22.4448897795591, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57349; Mature: 57218

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRKVSFRLMAGATAVGAMGMMAAAPAFAAKDAVMAVYSTFTTLDPYDANDTLSQAAVK
CCCCEEEEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SFYQGLFGFDKDMKLVNVLAESYDVSKDGLVYTIKLKKGVKFHDGTTFDATAVKANLDRV
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHHHHHHC
TDPANKLKRYTLFNRVAKTDVVDPNTVRITLKEPFSPFINVLAHPSAVMISPTALKKYGK
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEECHHHHHHHCC
EIAFHPVGTGPFEFVEWKQTDYLKGKKFAGYWKTGYPKIDTITWKPVVDNNTRSAVMQTG
EEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCCHHHHHCCC
EADFAFSIPFEQAAVLKASPKVDLIDGPSIIQRYLSLNTMVKPFNDPKVRQAINYAINKE
CCCEEEECCCHHHHHEECCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHH
ALAKVAFAGYAVPSAGVVPPGVDYAEKLGPWPYNPAKARELLKEAGYPNGFETTLWSAYN
HHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC
HTTAQKVIQFVQQQLQQVGIKAQVLALEAGQRVERVESVAKPEDAGVRMYYVGWSSSTGE
HHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
SDWALRPLLASEAMPPKLLNTAYYKNDQVDADIANALRTTDRAEKAKLYKDAQEQIWKDA
CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDEIDIKQ
CEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRKVSFRLMAGATAVGAMGMMAAAPAFAAKDAVMAVYSTFTTLDPYDANDTLSQAAVK
CCCEEEEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SFYQGLFGFDKDMKLVNVLAESYDVSKDGLVYTIKLKKGVKFHDGTTFDATAVKANLDRV
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCCCCHHHHHHHHHHC
TDPANKLKRYTLFNRVAKTDVVDPNTVRITLKEPFSPFINVLAHPSAVMISPTALKKYGK
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEECHHHHHHHCC
EIAFHPVGTGPFEFVEWKQTDYLKGKKFAGYWKTGYPKIDTITWKPVVDNNTRSAVMQTG
EEEEECCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCEECCCCHHHHHCCC
EADFAFSIPFEQAAVLKASPKVDLIDGPSIIQRYLSLNTMVKPFNDPKVRQAINYAINKE
CCCEEEECCCHHHHHEECCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHH
ALAKVAFAGYAVPSAGVVPPGVDYAEKLGPWPYNPAKARELLKEAGYPNGFETTLWSAYN
HHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC
HTTAQKVIQFVQQQLQQVGIKAQVLALEAGQRVERVESVAKPEDAGVRMYYVGWSSSTGE
HHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
SDWALRPLLASEAMPPKLLNTAYYKNDQVDADIANALRTTDRAEKAKLYKDAQEQIWKDA
CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PWAFLVTEKVLYARSKRLTGAYVMPDGSFNFDEIDIKQ
CEEEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA