Click here to switch to the map view.

The map label for this gene is dppB1 [H]

Identifier: 94310351

GI number: 94310351

Start: 1522673

End: 1523593

Strand: Direct

Name: dppB1 [H]

Synonym: Rmet_1409

Alternate gene names: 94310351

Gene position: 1522673-1523593 (Clockwise)

Preceding gene: 94310350

Following gene: 94310352

Centisome position: 38.76

GC content: 63.41

Gene sequence:

>921_bases
ATGCTGAACTACTTCCTTAAACGACTTCTGGGCGTGATACCCACCATGCTGATCGTGGCGGTGTTGGTATTCCTGTTCGT
CCATCTGCTGCCCGGCGATCCGGCGCGGCTGGCCGCGGGCCCGGAGGCCGACGCGGACACCGTGGAACTGGTGCGCAAGG
ATCTCGGGCTCGATCGCCCGATGCCGGAGCAGTTCGTGCGTTACTTCTCGAACGCCCTGCGGGGGGACTTCGGTACCTCG
CTGCGCACCAAGCGACCCGTTTCGGAAGAAATCGGCGACCGCTTCCTGCCCACGCTGTACCTGACGATCGCGTCGATGGT
CTGGGCCGTCATCTTCGGCATGACCATCGGCATCTGCTCGGCCGTGTGGCGGAATCAGTGGCCGGACCGCCTGGGCATGA
CGCTGGCGGTGTCGGGTATCTCGTTCCCGGCCTTCGCGCTGGGGATGCTGCTGATGGAAGTGTTTTCGGTGCAGCTTGGC
TGGCTGCCGTCGATCGGCGCCGATAGCTGGAAGCACTACATCCTGCCGTCGCTGACGCTCGGCGCGGCCGTGGCCGCCGT
GATGGCGCGATTCACGCGCGCATCGTTCATCGAGGTGCTGCAGGAGGACTTCGTCCGTACCGCACGCGCCAAGGGCGTGC
GCGAGACCGTGGTCGTGATCAAGCATACGCTGCGCAACGCAATGATTCCCGTCGTGACGATGATGGGCCTGCAGTTCGGC
TTTCTGCTGGGCGGCTCGATCCTCGTCGAGAAGGTGTTCAACTGGCCCGGCCTCGGCCGCCTGTTGGTGGATGCCGTGGA
GATGCGTGACTACCCGGTGATCCAGGCCGAGGTGCTGCTGTTCTCGCTCGAATTCATCCTGATCAACCTGGTGGTGGACG
TGCTGTACACCGTGATCAACCCCACCATCCGCTATAAATAA

Upstream 100 bases:

>100_bases
GTACTTATAACAAGCTGTATGCAGTAAGCCGTGTGGCTGCCTGCCCGTATACGCGGGGTTGAGGGCGGGCGGCCGGCGGT
CCTCAATTTTCCGTTGCCTG

Downstream 100 bases:

>100_bases
GGAGGCTGGCATGTCCGATATTTCCACGCCCGCCGCTCCCGAGGCCGCCAGCGTCCCGGAGGCCGTCCGCACGCCCTGGA
CCGAGTTCTGGCGCAAGTTC

Product: glutathione ABC transporter permease GsiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLNYFLKRLLGVIPTMLIVAVLVFLFVHLLPGDPARLAAGPEADADTVELVRKDLGLDRPMPEQFVRYFSNALRGDFGTS
LRTKRPVSEEIGDRFLPTLYLTIASMVWAVIFGMTIGICSAVWRNQWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLG
WLPSIGADSWKHYILPSLTLGAAVAAVMARFTRASFIEVLQEDFVRTARAKGVRETVVVIKHTLRNAMIPVVTMMGLQFG
FLLGGSILVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDVLYTVINPTIRYK

Sequences:

>Translated_306_residues
MLNYFLKRLLGVIPTMLIVAVLVFLFVHLLPGDPARLAAGPEADADTVELVRKDLGLDRPMPEQFVRYFSNALRGDFGTS
LRTKRPVSEEIGDRFLPTLYLTIASMVWAVIFGMTIGICSAVWRNQWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLG
WLPSIGADSWKHYILPSLTLGAAVAAVMARFTRASFIEVLQEDFVRTARAKGVRETVVVIKHTLRNAMIPVVTMMGLQFG
FLLGGSILVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDVLYTVINPTIRYK
>Mature_306_residues
MLNYFLKRLLGVIPTMLIVAVLVFLFVHLLPGDPARLAAGPEADADTVELVRKDLGLDRPMPEQFVRYFSNALRGDFGTS
LRTKRPVSEEIGDRFLPTLYLTIASMVWAVIFGMTIGICSAVWRNQWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLG
WLPSIGADSWKHYILPSLTLGAAVAAVMARFTRASFIEVLQEDFVRTARAKGVRETVVVIKHTLRNAMIPVVTMMGLQFG
FLLGGSILVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDVLYTVINPTIRYK

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=306, Percent_Identity=79.7385620915033, Blast_Score=509, Evalue=1e-146,
Organism=Escherichia coli, GI1789965, Length=342, Percent_Identity=42.3976608187134, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1789888, Length=312, Percent_Identity=39.1025641025641, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1787761, Length=326, Percent_Identity=40.1840490797546, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787497, Length=310, Percent_Identity=35.8064516129032, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1787550, Length=275, Percent_Identity=31.6363636363636, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=27.5482093663912, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34094; Mature: 34094

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNYFLKRLLGVIPTMLIVAVLVFLFVHLLPGDPARLAAGPEADADTVELVRKDLGLDRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCC
MPEQFVRYFSNALRGDFGTSLRTKRPVSEEIGDRFLPTLYLTIASMVWAVIFGMTIGICS
CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNQWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLGWLPSIGADSWKHYILPSLTL
HHHHCCCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GAAVAAVMARFTRASFIEVLQEDFVRTARAKGVRETVVVIKHTLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSILVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDVLYTVIN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIRYK
CCCCCC
>Mature Secondary Structure
MLNYFLKRLLGVIPTMLIVAVLVFLFVHLLPGDPARLAAGPEADADTVELVRKDLGLDRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCC
MPEQFVRYFSNALRGDFGTSLRTKRPVSEEIGDRFLPTLYLTIASMVWAVIFGMTIGICS
CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVWRNQWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLGWLPSIGADSWKHYILPSLTL
HHHHCCCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GAAVAAVMARFTRASFIEVLQEDFVRTARAKGVRETVVVIKHTLRNAMIPVVTMMGLQFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLLGGSILVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDVLYTVIN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTIRYK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA