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The map label for this gene is 94310339

Identifier: 94310339

GI number: 94310339

Start: 1505467

End: 1506420

Strand: Direct

Name: 94310339

Synonym: Rmet_1397

Alternate gene names: NA

Gene position: 1505467-1506420 (Clockwise)

Preceding gene: 94310338

Following gene: 94310340

Centisome position: 38.33

GC content: 65.2

Gene sequence:

>954_bases
ATGAACCGTCGGGCCATGTTCCTCGAAGTGCTTGGCATCCCGGCCGAATGGGTGCCCCGCAGGGCGCCGGAAACAACTGA
ACTTGCTCAGGCCGAAGTCGCCGAAATAGCTGAAGAGGTCGCCGGTGCCGCGCGCCCGTCGGCGGAGCCCGCGCAGGTTG
CGGTGTCTTCGGCCGTTGCGCCGGGATTGGCGGACTTCGCCGAAGTTGCCGAAGTCACTGACATTGGCAAACCTGCCGCG
GCACCGGATACCTTGCACGCCGTCAACGAGGCGGAGGTCGCGGAAACGATCGAAGCCTTCGATGCCCCTGGCCCAGCCCA
TGCCGTGGAAGTGCCGGTGCCTATCGCACTGGCGCCGGTGCAGGATGGCCGGGAAGCGTTGATTGCCACGATGGACTGGC
CGGTGCTGGCCGACAGCGTTGCCGGATGCACGGCCTGTGGCTTGTGCTCGACGCGCACGAACACCGTGTTTGGTGTCGGT
GATCAGCAGGCCGAATGGATGCTTGTTGGCGAGGCGCCTGGCGAAAACGAGGACCTGCAAGGCGAGCCGTTCGTCGGCCA
GGCTGGCAAGCTGCTCGACAACATGCTGGGGGCCCTGGGCCTGGCGCGTGGCCGCAACGTCTATATCGCCAACGTACTCA
AATGCCGTCCGCCCGGCAACCGCAATCCCGAGCCAGGCGAAGTGGCGCAATGCGAACCGTATCTGAAGCGCCAGATTGCG
CTGATCAAGCCGAAGGTGATTGTGGTTCTGGGCCGCTTCGCGGCGCAGTCGCTGCTGCGTTCCACCACGCCGATCGGCAA
GCTGCGCGGCGCGGTGCATAGCTATGAGGGCATCCCGGTGGTGGTGACTTATCACCCGGCCTATCTGCTGCGCACGCTGA
CCGACAAGGCACGCGCCTGGGAAGATCTTTGCCTGGCCCGCGAGGTACACGATCGTGCGGGACCTCAAGCCTGA

Upstream 100 bases:

>100_bases
ATTACCCGGCCACGGCGCTCGGGCGCGAGGACGCGCTGGTGCTGCGGCGCGACTGGTCGGCGGACCCGTCGGCGGCATTG
TCGACCGAGGAAGGTACGGT

Downstream 100 bases:

>100_bases
TCTCGCGCAGGGCATCGCCCCGGGCGGGCCGGCACTGACCGGCGCCGACGGGCAGATGCCGCTTTGGCGGCGCGCGCCCT
CGCAGCGTACCCGCGATCTG

Product: DNA polymerase bacteriophage-type,uracil-DNA glycosylase superfamily

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil DNA Glycosylase; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNRRAMFLEVLGIPAEWVPRRAPETTELAQAEVAEIAEEVAGAARPSAEPAQVAVSSAVAPGLADFAEVAEVTDIGKPAA
APDTLHAVNEAEVAETIEAFDAPGPAHAVEVPVPIALAPVQDGREALIATMDWPVLADSVAGCTACGLCSTRTNTVFGVG
DQQAEWMLVGEAPGENEDLQGEPFVGQAGKLLDNMLGALGLARGRNVYIANVLKCRPPGNRNPEPGEVAQCEPYLKRQIA
LIKPKVIVVLGRFAAQSLLRSTTPIGKLRGAVHSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGPQA

Sequences:

>Translated_317_residues
MNRRAMFLEVLGIPAEWVPRRAPETTELAQAEVAEIAEEVAGAARPSAEPAQVAVSSAVAPGLADFAEVAEVTDIGKPAA
APDTLHAVNEAEVAETIEAFDAPGPAHAVEVPVPIALAPVQDGREALIATMDWPVLADSVAGCTACGLCSTRTNTVFGVG
DQQAEWMLVGEAPGENEDLQGEPFVGQAGKLLDNMLGALGLARGRNVYIANVLKCRPPGNRNPEPGEVAQCEPYLKRQIA
LIKPKVIVVLGRFAAQSLLRSTTPIGKLRGAVHSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGPQA
>Mature_317_residues
MNRRAMFLEVLGIPAEWVPRRAPETTELAQAEVAEIAEEVAGAARPSAEPAQVAVSSAVAPGLADFAEVAEVTDIGKPAA
APDTLHAVNEAEVAETIEAFDAPGPAHAVEVPVPIALAPVQDGREALIATMDWPVLADSVAGCTACGLCSTRTNTVFGVG
DQQAEWMLVGEAPGENEDLQGEPFVGQAGKLLDNMLGALGLARGRNVYIANVLKCRPPGNRNPEPGEVAQCEPYLKRQIA
LIKPKVIVVLGRFAAQSLLRSTTPIGKLRGAVHSYEGIPVVVTYHPAYLLRTLTDKARAWEDLCLAREVHDRAGPQA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 33523; Mature: 33523

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRAMFLEVLGIPAEWVPRRAPETTELAQAEVAEIAEEVAGAARPSAEPAQVAVSSAVA
CCCCEEEHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
PGLADFAEVAEVTDIGKPAAAPDTLHAVNEAEVAETIEAFDAPGPAHAVEVPVPIALAPV
CCHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCEEEECC
QDGREALIATMDWPVLADSVAGCTACGLCSTRTNTVFGVGDQQAEWMLVGEAPGENEDLQ
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCC
GEPFVGQAGKLLDNMLGALGLARGRNVYIANVLKCRPPGNRNPEPGEVAQCEPYLKRQIA
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
LIKPKVIVVLGRFAAQSLLRSTTPIGKLRGAVHSYEGIPVVVTYHPAYLLRTLTDKARAW
HHCCHHHEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHH
EDLCLAREVHDRAGPQA
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNRRAMFLEVLGIPAEWVPRRAPETTELAQAEVAEIAEEVAGAARPSAEPAQVAVSSAVA
CCCCEEEHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
PGLADFAEVAEVTDIGKPAAAPDTLHAVNEAEVAETIEAFDAPGPAHAVEVPVPIALAPV
CCHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCEEEECC
QDGREALIATMDWPVLADSVAGCTACGLCSTRTNTVFGVGDQQAEWMLVGEAPGENEDLQ
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCC
GEPFVGQAGKLLDNMLGALGLARGRNVYIANVLKCRPPGNRNPEPGEVAQCEPYLKRQIA
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
LIKPKVIVVLGRFAAQSLLRSTTPIGKLRGAVHSYEGIPVVVTYHPAYLLRTLTDKARAW
HHCCHHHEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHH
EDLCLAREVHDRAGPQA
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA