Click here to switch to the map view.

The map label for this gene is 94310340

Identifier: 94310340

GI number: 94310340

Start: 1506401

End: 1507510

Strand: Direct

Name: 94310340

Synonym: Rmet_1398

Alternate gene names: NA

Gene position: 1506401-1507510 (Clockwise)

Preceding gene: 94310339

Following gene: 94310342

Centisome position: 38.35

GC content: 68.65

Gene sequence:

>1110_bases
GTGCGGGACCTCAAGCCTGATCTCGCGCAGGGCATCGCCCCGGGCGGGCCGGCACTGACCGGCGCCGACGGGCAGATGCC
GCTTTGGCGGCGCGCGCCCTCGCAGCGTACCCGCGATCTGGCGTGGAGTTCCTTGTCGCCGCCGCTGCTTTCCCGGCTGC
CGGATGGGGCCGATGTTGTGCGCGTGGCGCAATGGCCAGCCGGTGTGCGCGCCGCATGGCAGGACTGGCTGGCCCAGGCC
GATCCGTCCTCGCTCCCCGAGACCATCACCGAACTGAGCCACCACGCCGATGCCAACGACGGTCGCAGCCTCCGGCTGGG
CCGCCATGCCGAACGGTTGCTGCACTTCGCCTTGGACCATGCGCCGGGCATCGAACTGCTGGCGGCCAATGTGCCTATCC
GCCGCGCCAATGGGCATGGCGTGCAGACGCTCGGCGAACTCGACGTCGTCTGGCGCGATCCCGCCGTCATGGAAACCGTG
CATTGGGAAATGGCGGCCAAGTTCTATTTGATGGTCGATGGCATCGAGGACCGGTGGCTCGACCTTCGCGCGTTTGTCGG
GCCGAATCTCGTAGATCGGCTGGGCGACAAGCTCGACCATATCGTGCGCCGGCAATTGCCGCTGGGCCGCACCGCAGAGG
CGAAGGCCGCGCTCGGTCACGCGATCGACCGGAGCGAGGTCTATCTGCTGGGCTGGCTATTCTATCGGGACGGGGTGACG
CCGCCGGGGCTGGATGTGTTGGGTATCGCCCCCGATCACCAGCGCGGCTGGTGGTCCACGCTGGATGCCTGGATGGGCCG
TGCGTCGGAGCGGGCAGGTCAGGGGAGTGGCGCGGCGCGCTGGTGTCGTCTGCAGCGTGCAGACTGGCTGTCTGGCGCGC
GCGTGCCGGAGGCCGAAACCGAATCAGCCGAAGTGCTTCATGCGGTGCTGACGGAACGATTTACCGACGCGCATCCAGAC
CACGGCTGGCGGCGCGATGCGCCTGTCATGGTTTGTGAACTGGAGCCCGCCGGGACCGATCAGCCCGGCATTTGGGTGGA
GCGTTCGCGCGGCTTCGTCGTGCCGCCCGGCTGGGAAGCGCGCGCCATTGAACGGGCGCGCAGGGATTGA

Upstream 100 bases:

>100_bases
CCGGTGGTGGTGACTTATCACCCGGCCTATCTGCTGCGCACGCTGACCGACAAGGCACGCGCCTGGGAAGATCTTTGCCT
GGCCCGCGAGGTACACGATC

Downstream 100 bases:

>100_bases
CCGGCGCGGGGTGATGGTCCCCGCCAGCAGGGCCGCGGGCCCCGCCTGGGTCAGTGGTGCTTGTCCTCGCCGATCATCGC
CAGCGAGTTGTAGATCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRDLKPDLAQGIAPGGPALTGADGQMPLWRRAPSQRTRDLAWSSLSPPLLSRLPDGADVVRVAQWPAGVRAAWQDWLAQA
DPSSLPETITELSHHADANDGRSLRLGRHAERLLHFALDHAPGIELLAANVPIRRANGHGVQTLGELDVVWRDPAVMETV
HWEMAAKFYLMVDGIEDRWLDLRAFVGPNLVDRLGDKLDHIVRRQLPLGRTAEAKAALGHAIDRSEVYLLGWLFYRDGVT
PPGLDVLGIAPDHQRGWWSTLDAWMGRASERAGQGSGAARWCRLQRADWLSGARVPEAETESAEVLHAVLTERFTDAHPD
HGWRRDAPVMVCELEPAGTDQPGIWVERSRGFVVPPGWEARAIERARRD

Sequences:

>Translated_369_residues
MRDLKPDLAQGIAPGGPALTGADGQMPLWRRAPSQRTRDLAWSSLSPPLLSRLPDGADVVRVAQWPAGVRAAWQDWLAQA
DPSSLPETITELSHHADANDGRSLRLGRHAERLLHFALDHAPGIELLAANVPIRRANGHGVQTLGELDVVWRDPAVMETV
HWEMAAKFYLMVDGIEDRWLDLRAFVGPNLVDRLGDKLDHIVRRQLPLGRTAEAKAALGHAIDRSEVYLLGWLFYRDGVT
PPGLDVLGIAPDHQRGWWSTLDAWMGRASERAGQGSGAARWCRLQRADWLSGARVPEAETESAEVLHAVLTERFTDAHPD
HGWRRDAPVMVCELEPAGTDQPGIWVERSRGFVVPPGWEARAIERARRD
>Mature_369_residues
MRDLKPDLAQGIAPGGPALTGADGQMPLWRRAPSQRTRDLAWSSLSPPLLSRLPDGADVVRVAQWPAGVRAAWQDWLAQA
DPSSLPETITELSHHADANDGRSLRLGRHAERLLHFALDHAPGIELLAANVPIRRANGHGVQTLGELDVVWRDPAVMETV
HWEMAAKFYLMVDGIEDRWLDLRAFVGPNLVDRLGDKLDHIVRRQLPLGRTAEAKAALGHAIDRSEVYLLGWLFYRDGVT
PPGLDVLGIAPDHQRGWWSTLDAWMGRASERAGQGSGAARWCRLQRADWLSGARVPEAETESAEVLHAVLTERFTDAHPD
HGWRRDAPVMVCELEPAGTDQPGIWVERSRGFVVPPGWEARAIERARRD

Specific function: Unknown

COG id: COG3782

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40932; Mature: 40932

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLKPDLAQGIAPGGPALTGADGQMPLWRRAPSQRTRDLAWSSLSPPLLSRLPDGADVV
CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHCCCCHHEE
RVAQWPAGVRAAWQDWLAQADPSSLPETITELSHHADANDGRSLRLGRHAERLLHFALDH
EEHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHC
APGIELLAANVPIRRANGHGVQTLGELDVVWRDPAVMETVHWEMAAKFYLMVDGIEDRWL
CCCCEEEECCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHEEEEEEECCCHHHH
DLRAFVGPNLVDRLGDKLDHIVRRQLPLGRTAEAKAALGHAIDRSEVYLLGWLFYRDGVT
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCCC
PPGLDVLGIAPDHQRGWWSTLDAWMGRASERAGQGSGAARWCRLQRADWLSGARVPEAET
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
ESAEVLHAVLTERFTDAHPDHGWRRDAPVMVCELEPAGTDQPGIWVERSRGFVVPPGWEA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEECCCCCH
RAIERARRD
HHHHHHHCC
>Mature Secondary Structure
MRDLKPDLAQGIAPGGPALTGADGQMPLWRRAPSQRTRDLAWSSLSPPLLSRLPDGADVV
CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHCCCCHHEE
RVAQWPAGVRAAWQDWLAQADPSSLPETITELSHHADANDGRSLRLGRHAERLLHFALDH
EEHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHC
APGIELLAANVPIRRANGHGVQTLGELDVVWRDPAVMETVHWEMAAKFYLMVDGIEDRWL
CCCCEEEECCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHEEEEEEECCCHHHH
DLRAFVGPNLVDRLGDKLDHIVRRQLPLGRTAEAKAALGHAIDRSEVYLLGWLFYRDGVT
HHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHCCCC
PPGLDVLGIAPDHQRGWWSTLDAWMGRASERAGQGSGAARWCRLQRADWLSGARVPEAET
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
ESAEVLHAVLTERFTDAHPDHGWRRDAPVMVCELEPAGTDQPGIWVERSRGFVVPPGWEA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCEEECCCCCH
RAIERARRD
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA