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The map label for this gene is trbB [H]

Identifier: 94310283

GI number: 94310283

Start: 1450744

End: 1451808

Strand: Direct

Name: trbB [H]

Synonym: Rmet_1341

Alternate gene names: 94310283

Gene position: 1450744-1451808 (Clockwise)

Preceding gene: 94310282

Following gene: 94310284

Centisome position: 36.93

GC content: 69.77

Gene sequence:

>1065_bases
ATGAGCGCCCGAATCTCCATTGAAGGGCAGTCCATGAGTGCCACGTCGCTCGACCGCCGCATCCAGATGCTGCGCACGGC
GATGGGGCCGCTGATCGCCGCCGCGCTCGAAGACCCGGACGTGGTGGAGGTGATGCTGAATCCCGATCGCACCCTTTGGG
TGGATCGGCTTTCCAGTGGGCGCGCGCCGATGGGCGTGGAACTGCCCGAGGCGGACGGCGAGCGAATCATCCGCCTCGTG
GCCGCCCACGTTGGCGCGGAAGTCCATCGCGGCCAGCCGCTGCTGTCCGCCGAGTTGCCCGAGACGGGCGAACGCTTCGA
GGGCATTTTGCCGCCGGCAGCGCCGGGGCCGGCCTTCGCGCTGCGCAAGCGGGCCATCGGCGTGATTCCGCTGGAGCGCT
ACGTCGTGGAGGGAATGATGACCGCCGCACAGGCGGGCTTTCTCGTTCGCGCCGTACGCGAGCGGCAGAACGTGCTGATC
GCCGGCGCCACCAGCAGCGGCAAGACGACCTTGGCGAACGCGCTGCTGGCCGAGATCGCCGCCACCGGCGACCGCGTGCT
GGTGCTCGAAGACACTGTGGAACTGCAATGCGCGGCCCGCGACCACGTTCCGCTGCGCACACGCGCGGGCGTGGTGTCCA
TGACGGAGCTGGTGCGCTCGTCCATGCGACTGCGGCCCGATCGTGTCGTCGTCGGCGAGGTGCGCGGCGCCGAGGCGCTG
GATCTCATCAAGGTGTGGGGCACGGGCCACCCCGGCGGCATCGCCACGATCCACGCCGGCTCCGCGCTCGGCGCGCTGCT
GCGCCTGGAGCAACTGATTCTCGAAGTGGCCGTGAATCCGCCCCGTGCGCTGATCGCCGAGGCGGTCAACGTGGTGATCC
ACATCGCCGGGCGCGGGCGCAAGCGCCGCATCGAGAGCATCGCCCGCGTCGTCGGCTTCGACGGCGTGGGCTACCAACTG
GCGGACGCGCTGGAAACGTCGTTTCCCGAGCTACTGCCGATCCCCGATGCCGCATCCGCTGCGGCGACTTCCCCGTCCCC
TGACCAACCTGGAGAACTGCCATGA

Upstream 100 bases:

>100_bases
GGGGCCGCAGCCTGGTGCGTGACGTGGTGGAGGAGTTGCATCCCGACCCGATGCGAATGGAGGACGCGGCGGCAGCCACG
CAAGCGCAGGAGCGTGCGTC

Downstream 100 bases:

>100_bases
CGCAGATGACCATTTCTGCTTTCCGTGTTTCCGTAAATCCGGCTTTGCGCCTTGCACGGCTGCGTAGCCTGGCCCGCCCT
GCTGGGCAAGGGCTGCTGCT

Product: P-type conjugative transfer ATPase TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPMGVELPEADGERIIRLV
AAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFALRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLI
AGATSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRRIESIARVVGFDGVGYQL
ADALETSFPELLPIPDAASAAATSPSPDQPGELP

Sequences:

>Translated_354_residues
MSARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPMGVELPEADGERIIRLV
AAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFALRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLI
AGATSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRRIESIARVVGFDGVGYQL
ADALETSFPELLPIPDAASAAATSPSPDQPGELP
>Mature_353_residues
SARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSGRAPMGVELPEADGERIIRLVA
AHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFALRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLIA
GATSSGKTTLANALLAEIAATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEALD
LIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRRIESIARVVGFDGVGYQLA
DALETSFPELLPIPDAASAAATSPSPDQPGELP

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 37493; Mature: 37362

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSG
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHCCC
RAPMGVELPEADGERIIRLVAAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFA
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCEECCCCCCHHHHCCCCCCCCCCHHHH
LRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLIAGATSSGKTTLANALLAEIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH
ATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
CCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGR
HHHEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCH
KRRIESIARVVGFDGVGYQLADALETSFPELLPIPDAASAAATSPSPDQPGELP
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SARISIEGQSMSATSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWVDRLSSG
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHCCC
RAPMGVELPEADGERIIRLVAAHVGAEVHRGQPLLSAELPETGERFEGILPPAAPGPAFA
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCEECCCCCCHHHHCCCCCCCCCCHHHH
LRKRAIGVIPLERYVVEGMMTAAQAGFLVRAVRERQNVLIAGATSSGKTTLANALLAEIA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHH
ATGDRVLVLEDTVELQCAARDHVPLRTRAGVVSMTELVRSSMRLRPDRVVVGEVRGAEAL
CCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
DLIKVWGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGR
HHHEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCH
KRRIESIARVVGFDGVGYQLADALETSFPELLPIPDAASAAATSPSPDQPGELP
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]