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The map label for this gene is trbC

Identifier: 94310284

GI number: 94310284

Start: 1451805

End: 1452188

Strand: Direct

Name: trbC

Synonym: Rmet_1342

Alternate gene names: NA

Gene position: 1451805-1452188 (Clockwise)

Preceding gene: 94310283

Following gene: 94310285

Centisome position: 36.96

GC content: 64.84

Gene sequence:

>384_bases
ATGACGCAGATGACCATTTCTGCTTTCCGTGTTTCCGTAAATCCGGCTTTGCGCCTTGCACGGCTGCGTAGCCTGGCCCG
CCCTGCTGGGCAAGGGCTGCTGCTGGCCGCGCTGCTGCTGTTCCTGGCCGGCACCGCGCAGGCCGCCGGTTCCTCGATGC
CGTGGGAAGGCCCGCTGCAATCCATCCTCGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATCATCATCATC
GCAACCGGCCTCGCGCTGGCCTTCGGCGACACGTCGGGTGGTTTCCGCAAGCTGATCCAGATCGTGTTCGGCCTGTCCAT
CGCGTTCGCGGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCCGGCGGGGCCGTCGTATGA

Upstream 100 bases:

>100_bases
CGGACGCGCTGGAAACGTCGTTTCCCGAGCTACTGCCGATCCCCGATGCCGCATCCGCTGCGGCGACTTCCCCGTCCCCT
GACCAACCTGGAGAACTGCC

Downstream 100 bases:

>100_bases
GCGGCCCGGATACCTTCGCGGCTGGGTTCGAGGTGCCGCTGCATCGCTCGCTGACCGAGCCGATCCTGCTGGGCGGTGCG
CCGCGCACCGTGGCAATCGC

Product: conjugal transfer TrbC transmembrane protein

Products: NA

Alternate protein names: Conjugal Transfer Protein Trbc; Conjugal Transfer Protein; TrbC-Like Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component; Conjugal Transfer TrbC Transmembrane Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTQMTISAFRVSVNPALRLARLRSLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIII
ATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Sequences:

>Translated_127_residues
MTQMTISAFRVSVNPALRLARLRSLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIII
ATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV
>Mature_126_residues
TQMTISAFRVSVNPALRLARLRSLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIA
TGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13143; Mature: 13012

Theoretical pI: Translated: 12.38; Mature: 12.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQMTISAFRVSVNPALRLARLRSLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQ
CCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHH
SILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFS
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSGGAVV
CCCCCCC
>Mature Secondary Structure 
TQMTISAFRVSVNPALRLARLRSLARPAGQGLLLAALLLFLAGTAQAAGSSMPWEGPLQ
CCCHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCHHH
SILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFS
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSGGAVV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA