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The map label for this gene is hoxL [H]

Identifier: 94310236

GI number: 94310236

Start: 1409487

End: 1409789

Strand: Reverse

Name: hoxL [H]

Synonym: Rmet_1292

Alternate gene names: 94310236

Gene position: 1409789-1409487 (Counterclockwise)

Preceding gene: 94310237

Following gene: 94310235

Centisome position: 35.89

GC content: 69.64

Gene sequence:

>303_bases
ATGTGCATCGGCATCCCCATGCAGGTGGTCGAGGCCGATGGCCGCTTCGCCTTGTGCGAAGGCCGCGGCGAGCGCCGCCG
CATCAACACCGCCCTGGTCGGCGAGGTCTCCAGCGGCGATTGGCTGCTGGTCTTCCTCGACGACGCGCGCGAGCGCATCG
ATACCGACCGCGCGACCGAGGTGAACGCGGCGCTGGACCTGGTGCTCGGTGCCATGCAGGGTCTGGAGGCGCAGGATGAC
GCGGGCTTTGCCCTGCCGTCGCAGATGAGCCCGGAACAAATGCGCGCCCTGACCGGCGCCTGA

Upstream 100 bases:

>100_bases
TTGGACGAGCTGGCGCTGACCGCCTACGAAGCGCAGCGACCCGCCGCGGAAGAAGCCTGCCGCATCGGCGACGACCGGCT
CCTGGTGAAGGACCTCTGAC

Downstream 100 bases:

>100_bases
ACACAAGGAGACACCATGATTGAAACCACAGAAGCCCACGCCCCCCTGGTCCAGCGCCTCGCGCGCGAGTTCGGTGCCAC
CTGGGTCGACGAGACCAGCG

Product: HoxL hydrogenase expression/formation protein hoxL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MCIGIPMQVVEADGRFALCEGRGERRRINTALVGEVSSGDWLLVFLDDARERIDTDRATEVNAALDLVLGAMQGLEAQDD
AGFALPSQMSPEQMRALTGA

Sequences:

>Translated_100_residues
MCIGIPMQVVEADGRFALCEGRGERRRINTALVGEVSSGDWLLVFLDDARERIDTDRATEVNAALDLVLGAMQGLEAQDD
AGFALPSQMSPEQMRALTGA
>Mature_100_residues
MCIGIPMQVVEADGRFALCEGRGERRRINTALVGEVSSGDWLLVFLDDARERIDTDRATEVNAALDLVLGAMQGLEAQDD
AGFALPSQMSPEQMRALTGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 10781; Mature: 10781

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS01097 HUPF_HYPC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIGIPMQVVEADGRFALCEGRGERRRINTALVGEVSSGDWLLVFLDDARERIDTDRATE
CCCCCCCEEEECCCCEEEECCCCCCEEECEEEEEECCCCCEEEEEECCCHHHCCCCCCHH
VNAALDLVLGAMQGLEAQDDAGFALPSQMSPEQMRALTGA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MCIGIPMQVVEADGRFALCEGRGERRRINTALVGEVSSGDWLLVFLDDARERIDTDRATE
CCCCCCCEEEECCCCEEEECCCCCCEEECEEEEEECCCCCEEEEEECCCHHHCCCCCCHH
VNAALDLVLGAMQGLEAQDDAGFALPSQMSPEQMRALTGA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]