Click here to switch to the map view.

The map label for this gene is hoxO [H]

Identifier: 94310235

GI number: 94310235

Start: 1409022

End: 1409471

Strand: Reverse

Name: hoxO [H]

Synonym: Rmet_1291

Alternate gene names: 94310235

Gene position: 1409471-1409022 (Counterclockwise)

Preceding gene: 94310236

Following gene: 94310234

Centisome position: 35.88

GC content: 70.67

Gene sequence:

>450_bases
ATGATTGAAACCACAGAAGCCCACGCCCCCCTGGTCCAGCGCCTCGCGCGCGAGTTCGGTGCCACCTGGGTCGACGAGAC
CAGCGTCGCCGACTGGAGCGCCGGCGGCGGCGACCGCGTTGTGCTGCTGGCCGGCGACCCGGTGCGCTTTCCCGAAGGCG
TGGACGTGGCGGCGGTGCTGCCCGAACTCATGAAGTCGTTCCCGAACCGCTTCCGCATCGCCGTGGTGCCGCGCGACAGC
GAGGATGCGGTGGCCAAGCGCTACGGCTCTCAGCGCTGGCCCACGCTGCTGTTCTTTCGCGACGGCCAGTACGTGACCGC
CATCGCCGGCATGCAGGACTGGGACGTGTACCTGTCCGGCGTCGCCGCCGCGCTGGCCATGCCGCCCTCGCGCCCGCCCA
CCATCGGCATTCCTGTCGTCAGCCAGACCGGCGGCAGCAGCTGCCACTGA

Upstream 100 bases:

>100_bases
GGGTCTGGAGGCGCAGGATGACGCGGGCTTTGCCCTGCCGTCGCAGATGAGCCCGGAACAAATGCGCGCCCTGACCGGCG
CCTGAACACAAGGAGACACC

Downstream 100 bases:

>100_bases
GCCCGCCGACCGAACCCCCACAGGAGACCGCATGAAAGCCTTCCCCATTCCCGTCGTCGCCCTCGGCCCCGGCACCCAGA
CCGAGGACGAGCACCTCGAC

Product: hydrogenase expression/formation protein HoxO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MIETTEAHAPLVQRLAREFGATWVDETSVADWSAGGGDRVVLLAGDPVRFPEGVDVAAVLPELMKSFPNRFRIAVVPRDS
EDAVAKRYGSQRWPTLLFFRDGQYVTAIAGMQDWDVYLSGVAAALAMPPSRPPTIGIPVVSQTGGSSCH

Sequences:

>Translated_149_residues
MIETTEAHAPLVQRLAREFGATWVDETSVADWSAGGGDRVVLLAGDPVRFPEGVDVAAVLPELMKSFPNRFRIAVVPRDS
EDAVAKRYGSQRWPTLLFFRDGQYVTAIAGMQDWDVYLSGVAAALAMPPSRPPTIGIPVVSQTGGSSCH
>Mature_149_residues
MIETTEAHAPLVQRLAREFGATWVDETSVADWSAGGGDRVVLLAGDPVRFPEGVDVAAVLPELMKSFPNRFRIAVVPRDS
EDAVAKRYGSQRWPTLLFFRDGQYVTAIAGMQDWDVYLSGVAAALAMPPSRPPTIGIPVVSQTGGSSCH

Specific function: Not Known. Could Form, Along With Hyad, A Complex Involved In The Processing Of The Hydrogenase 1 Structural Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupG/hyaE family [H]

Homologues:

Organism=Escherichia coli, GI1787210, Length=106, Percent_Identity=36.7924528301887, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010893
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF07449 HyaE [H]

EC number: NA

Molecular weight: Translated: 16070; Mature: 16070

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETTEAHAPLVQRLAREFGATWVDETSVADWSAGGGDRVVLLAGDPVRFPEGVDVAAVL
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
PELMKSFPNRFRIAVVPRDSEDAVAKRYGSQRWPTLLFFRDGQYVTAIAGMQDWDVYLSG
HHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHH
VAAALAMPPSRPPTIGIPVVSQTGGSSCH
HHHHHHCCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MIETTEAHAPLVQRLAREFGATWVDETSVADWSAGGGDRVVLLAGDPVRFPEGVDVAAVL
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
PELMKSFPNRFRIAVVPRDSEDAVAKRYGSQRWPTLLFFRDGQYVTAIAGMQDWDVYLSG
HHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHH
VAAALAMPPSRPPTIGIPVVSQTGGSSCH
HHHHHHCCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]