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The map label for this gene is tnpA

Identifier: 94310206

GI number: 94310206

Start: 1383234

End: 1384484

Strand: Reverse

Name: tnpA

Synonym: Rmet_1262

Alternate gene names: NA

Gene position: 1384484-1383234 (Counterclockwise)

Preceding gene: 94310207

Following gene: 94310205

Centisome position: 35.25

GC content: 60.03

Gene sequence:

>1251_bases
ATGCCTCGCAAACCGAAAGCCCCGCTGGCAGAGCTGCCGGCGATCCCCGCCGAGCTGCTTGAGCAGTTCGGCAATGGCCC
GATGACGGCCGAAGCCATCCATGCCGCGACCCTGGCACTCAAGAAAGCGCTGATCGAGCGAGCCCTGGGCGGCGAGATGA
ATCATCATCTCGGCTATTCACCGGGCGCAGCCAAACCAGCCGCCGTCACCAACCAGCGCAACGGTAAAGGTGCGAAGACG
GTTCTGACCGAAGATGGCCCAATCCGAATCGAGGTGCCTCGCGACCGTGACGGCAGCTTCGAGCCGTTGCTGATTCCAAA
GCACGAACGGCGCTTCACGGGCTTCGATGACAAGATCGTCGCCATGTACGCTCGGGGCATGACCGTGCGCGAGATTCAGG
GTTTCCTGCAGGAGCAATACGGCACCGAGGTCTCGCCCGATTTCATCAGTTCGGTTACCGACGAGGTCATGGCCGAAGTC
ACCGCCTGGCAAGCCAGGCCGCTTGAGCAGATGTATCCGGTCGTGTTCTTCGACGCACTGCGAGTGAAGATCCGTGAGGA
TGCCGTCGTACGCAACAAGGCGGTCTATCTGGCGCTGGGCGTTCTGCCCGACGGCACGCGCGAGATTCTGGGGCTGTGGA
TCGAGAACACCGAAGGCGCCAAGTTCTGGATGAAGGTTTTCAACGATCTCAAGACGCGCGGCGTCAACGACATTCTGATC
GCAGTGACCGACGGCCTCAAGGGCATGCCGGAGGCGCTGAGCGCAGTATTCCCGGCGACCACGCTGCAAACCTGCATCGT
CCATCTGATCCGCAACAGCCTGAATTACGCTAGCTGGAAAGATCGCAAAGCGCTAGCCGCCGCGATCCGGCCGATCTACA
CCGCGCCGAGTGCGGAAGCCGCCGAAGCTGAGCTCAATACGTTTGCCGCGGGACCATGGGGGCAGAAATTCCCGACGGTC
AGCGCTTCATGGCGTAACGCCTGGGACCGCGTGATCCCGTTCTTCGCATTTCCGCCGGCGGTGCGCAGGGTGATCTACAC
GACAAATGCCATAGAAAATATCAATTCGCAGCTACGCAAGATCATCAAGACCCGAGGCCACTTCCCGAGCGACGAGGCAG
CGACTAAGCTTATCTGGCTGGCGCTACGCAATATCACCTCTGACTGGGGTCGTGCCGCAAAAGATTGGAAGGACGCAATG
AACCAATTTGCTATCCTCTACCAGGATCGATTCGTTCGACCATCCGTGTGA

Upstream 100 bases:

>100_bases
CAGCAACTGACGCTGACCCAGGGTCACGCAACATGCTGGGCATCAACGGGACTGTCGGAGATTTCGTGTTTAAGGCATAA
CATGCTCCCAAGGAGAATGT

Downstream 100 bases:

>100_bases
TTCTCAACCCGCCTTGAACACGGAAATTCTGACACCCCCGCATCAACTTGGTGACCCAGGTGGGTCAAATCTAATGTGCT
GCACAACGGCCCAAGTGGGT

Product: transposase IS1090

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPRKPKAPLAELPAIPAELLEQFGNGPMTAEAIHAATLALKKALIERALGGEMNHHLGYSPGAAKPAAVTNQRNGKGAKT
VLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFTGFDDKIVAMYARGMTVREIQGFLQEQYGTEVSPDFISSVTDEVMAEV
TAWQARPLEQMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTREILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
AVTDGLKGMPEALSAVFPATTLQTCIVHLIRNSLNYASWKDRKALAAAIRPIYTAPSAEAAEAELNTFAAGPWGQKFPTV
SASWRNAWDRVIPFFAFPPAVRRVIYTTNAIENINSQLRKIIKTRGHFPSDEAATKLIWLALRNITSDWGRAAKDWKDAM
NQFAILYQDRFVRPSV

Sequences:

>Translated_416_residues
MPRKPKAPLAELPAIPAELLEQFGNGPMTAEAIHAATLALKKALIERALGGEMNHHLGYSPGAAKPAAVTNQRNGKGAKT
VLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFTGFDDKIVAMYARGMTVREIQGFLQEQYGTEVSPDFISSVTDEVMAEV
TAWQARPLEQMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTREILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
AVTDGLKGMPEALSAVFPATTLQTCIVHLIRNSLNYASWKDRKALAAAIRPIYTAPSAEAAEAELNTFAAGPWGQKFPTV
SASWRNAWDRVIPFFAFPPAVRRVIYTTNAIENINSQLRKIIKTRGHFPSDEAATKLIWLALRNITSDWGRAAKDWKDAM
NQFAILYQDRFVRPSV
>Mature_415_residues
PRKPKAPLAELPAIPAELLEQFGNGPMTAEAIHAATLALKKALIERALGGEMNHHLGYSPGAAKPAAVTNQRNGKGAKTV
LTEDGPIRIEVPRDRDGSFEPLLIPKHERRFTGFDDKIVAMYARGMTVREIQGFLQEQYGTEVSPDFISSVTDEVMAEVT
AWQARPLEQMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTREILGLWIENTEGAKFWMKVFNDLKTRGVNDILIA
VTDGLKGMPEALSAVFPATTLQTCIVHLIRNSLNYASWKDRKALAAAIRPIYTAPSAEAAEAELNTFAAGPWGQKFPTVS
ASWRNAWDRVIPFFAFPPAVRRVIYTTNAIENINSQLRKIIKTRGHFPSDEAATKLIWLALRNITSDWGRAAKDWKDAMN
QFAILYQDRFVRPSV

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 46297; Mature: 46166

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKPKAPLAELPAIPAELLEQFGNGPMTAEAIHAATLALKKALIERALGGEMNHHLGYS
CCCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGAAKPAAVTNQRNGKGAKTVLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFTGFDDKIV
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHH
AMYARGMTVREIQGFLQEQYGTEVSPDFISSVTDEVMAEVTAWQARPLEQMYPVVFFDAL
HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RVKIREDAVVRNKAVYLALGVLPDGTREILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
HHHHHHHHHHHCCEEEEEEECCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
AVTDGLKGMPEALSAVFPATTLQTCIVHLIRNSLNYASWKDRKALAAAIRPIYTAPSAEA
EEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHH
AEAELNTFAAGPWGQKFPTVSASWRNAWDRVIPFFAFPPAVRRVIYTTNAIENINSQLRK
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IIKTRGHFPSDEAATKLIWLALRNITSDWGRAAKDWKDAMNQFAILYQDRFVRPSV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PRKPKAPLAELPAIPAELLEQFGNGPMTAEAIHAATLALKKALIERALGGEMNHHLGYS
CCCCCCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PGAAKPAAVTNQRNGKGAKTVLTEDGPIRIEVPRDRDGSFEPLLIPKHERRFTGFDDKIV
CCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHH
AMYARGMTVREIQGFLQEQYGTEVSPDFISSVTDEVMAEVTAWQARPLEQMYPVVFFDAL
HHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RVKIREDAVVRNKAVYLALGVLPDGTREILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
HHHHHHHHHHHCCEEEEEEECCCCCHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCEEEE
AVTDGLKGMPEALSAVFPATTLQTCIVHLIRNSLNYASWKDRKALAAAIRPIYTAPSAEA
EEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHH
AEAELNTFAAGPWGQKFPTVSASWRNAWDRVIPFFAFPPAVRRVIYTTNAIENINSQLRK
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IIKTRGHFPSDEAATKLIWLALRNITSDWGRAAKDWKDAMNQFAILYQDRFVRPSV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]