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The map label for this gene is 94310143

Identifier: 94310143

GI number: 94310143

Start: 1317096

End: 1317692

Strand: Direct

Name: 94310143

Synonym: Rmet_1198

Alternate gene names: NA

Gene position: 1317096-1317692 (Clockwise)

Preceding gene: 94310142

Following gene: 94310144

Centisome position: 33.53

GC content: 60.13

Gene sequence:

>597_bases
ATGACTACCTGCGTTGTCGTCAGGAAAGGTGACGAGGTGGCGATCGGTGCCGATGCGCTGGTGACATTCGGCGATACGCG
GCTGTCGCGCGCTTATGAGCGGAACCAGAAGGTGATTCCCGTTGGCGACAGCTTCGTCGGGCTGGCAGGCACCACCGCGC
ATTTCCCGGTCATGCGCAGCTTGCTGACGGGCATGGGCGAGGAATGCCGGCTGCATACCCGTGACGATGTGTTCCGAACC
TTTCTCAAGGTGCATGAAAAGCTCAAGAACGAGTATTTCATCAACACCAAGGAAGACGAGGACGACCCCTACGAGTCATC
GCAGATCGTCTGCCTGATCGCCAATTCGGGCGGCATTTTCGGCGTTTATTCGTACCGCGAGGTGTTTTCGTTCGATCGTT
TCTGGGGCATTGGCTCGGGCCGCAACTACGCGCTCGGCGCCATGCACGCGGTGTATGACCGCACGGACCTGGATGCCGGA
GCGATCGCGAGGATCGGCGTGGAAGCGGGTATCGAGTTCGACAAGAGTTCGGCGGCACCGATCGACGTGCACACGGTACG
GCTGCAAGTGGCAACCAACAAAGACGGCGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCGCTGCTGGCGGATTTCCGCCGGATTCTGCTGTAAGCATCGGCAACGCCCGCCAGCGAACCTGGCGGGCGCGTCTGCA
TTGCATTCAAGGGGCGAGCC

Downstream 100 bases:

>100_bases
TCCCAAGGCGGGCAGGGCGCGCATCCCAGGAGGAAGAACATGAGTGTGATCGAAGTCAAGGTGCCGGATATCGGCGATTT
CGACGCGGTGGAAGTGATCG

Product: putative 20S proteasome, A and B subunits

Products: NA

Alternate protein names: ATP-Dependent Protease HslVU Peptidase Subunit; 20S Proteasome A/B Subunit; Hydrolase Proteasome Hslv Type Peptidase Domain; ATP-Dependent Protease Peptidase Subunit

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTTCVVVRKGDEVAIGADALVTFGDTRLSRAYERNQKVIPVGDSFVGLAGTTAHFPVMRSLLTGMGEECRLHTRDDVFRT
FLKVHEKLKNEYFINTKEDEDDPYESSQIVCLIANSGGIFGVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDRTDLDAG
AIARIGVEAGIEFDKSSAAPIDVHTVRLQVATNKDGAA

Sequences:

>Translated_198_residues
MTTCVVVRKGDEVAIGADALVTFGDTRLSRAYERNQKVIPVGDSFVGLAGTTAHFPVMRSLLTGMGEECRLHTRDDVFRT
FLKVHEKLKNEYFINTKEDEDDPYESSQIVCLIANSGGIFGVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDRTDLDAG
AIARIGVEAGIEFDKSSAAPIDVHTVRLQVATNKDGAA
>Mature_197_residues
TTCVVVRKGDEVAIGADALVTFGDTRLSRAYERNQKVIPVGDSFVGLAGTTAHFPVMRSLLTGMGEECRLHTRDDVFRTF
LKVHEKLKNEYFINTKEDEDDPYESSQIVCLIANSGGIFGVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDRTDLDAGA
IARIGVEAGIEFDKSSAAPIDVHTVRLQVATNKDGAA

Specific function: Unknown

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21739; Mature: 21607

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTCVVVRKGDEVAIGADALVTFGDTRLSRAYERNQKVIPVGDSFVGLAGTTAHFPVMRS
CCEEEEEECCCEEEECCCEEEEECCHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHH
LLTGMGEECRLHTRDDVFRTFLKVHEKLKNEYFINTKEDEDDPYESSQIVCLIANSGGIF
HHHCCCCCCEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCEE
GVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDRTDLDAGAIARIGVEAGIEFDKSSAAP
EEEHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCEEEEHHHCCCEECCCCCCC
IDVHTVRLQVATNKDGAA
EEEEEEEEEEECCCCCCC
>Mature Secondary Structure 
TTCVVVRKGDEVAIGADALVTFGDTRLSRAYERNQKVIPVGDSFVGLAGTTAHFPVMRS
CEEEEEECCCEEEECCCEEEEECCHHHHHHHHHCCEEEEECCCEEECCCCCHHHHHHHH
LLTGMGEECRLHTRDDVFRTFLKVHEKLKNEYFINTKEDEDDPYESSQIVCLIANSGGIF
HHHCCCCCCEECCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCEE
GVYSYREVFSFDRFWGIGSGRNYALGAMHAVYDRTDLDAGAIARIGVEAGIEFDKSSAAP
EEEHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCEEEEHHHCCCEECCCCCCC
IDVHTVRLQVATNKDGAA
EEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA