| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ybfF [C]
Identifier: 94310102
GI number: 94310102
Start: 1266068
End: 1266949
Strand: Direct
Name: ybfF [C]
Synonym: Rmet_1157
Alternate gene names: 94310102
Gene position: 1266068-1266949 (Clockwise)
Preceding gene: 94310099
Following gene: 94310103
Centisome position: 32.23
GC content: 64.63
Gene sequence:
>882_bases ATGTCTTCCAGTCCGCGCCTCGGCTTCGTACAGTGCATCAGTGCCGCCGGCCTGCATCGCATGGCCTATCACGAGTGGGG AGATCCCGCGAATCAGCGAGTGCTGGTGTGCGTGCACGGCCTGACCCGTACCGGACGTGATTTCGATGCGCTGGCACGTT CGTTGAGCGACGAGTACCGCGTGGTGTGCCCGGACGTGGCGGGCCGTGGCCGCTCCGACTGGCTGGCCGACCCGCGGGGC TACGTGTTGCCGCAGTACGTGTCCGATATGGTCACGCTGATCGCGCGACTGAACGTCGAACAGGTGGACTGGTTCGGCAC GTCGATGGGCGGGCTGATCGGCATCGGGCTGGCCGGGCTGGCCAAGTCGCCGGTGCGCAAGCTGCTGCTCAACGATGTGG GTCCGCGCATCACCGCGCAATCGATGGAACGGATTGGTGCGTATCTGGGTTTGCCGGTGCGCTTCAAGACGTTCGAGGAA GGGTTGGCCTATCTGCAAACGATCAGCGCTTCATTCGGCCGTCATACTCCCGAGCAGTGGCGCGAGTTGAATGGCGCGAT CCTGAAACCGGTGCAGGGCGCCGAGGGGCTCGAATGGGGATTGCATTACGACCCGGCGCTGGCCGTGCCGTTCAAGGACG CGACGCCGGAGGCGATGCAGGCTGGTGAGGCCGCGCTGTGGGCGATGTTCGAGGCCATTCAAGGGCCGACACTGGTGGTG CGCGGCGCGCAGTCCGATCTGCTGATGCGCGAGATCCTGGCCGAAATGGTGGCGCGCGGAAAGCAGGTGTCGAGCGTGGA GATTCCCGATGTGGGTCATGCTCCGACCTTCGTCGATGCGGCGCAGATTGCCATCGCCCGTCAATTTTTCCTGGGGTCTT GA
Upstream 100 bases:
>100_bases GGTTCAACCGCCCGGTTCGACCGTCGTACTTTCCGAAGTAGTCATATCGCTTAACCTTTCGCGCCATCATGCCTGCGGCG CGAGATTGCAGGGAGTCCAG
Downstream 100 bases:
>100_bases GCCCCGCTACTGAACGAAAACTGTCATGAGCACCAACACCCTGAAGCGCGCCCACGTGGGCAAGCGTCTGTCCGAATACG CGGTCTACAACGGCGTGGTC
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSSSPRLGFVQCISAAGLHRMAYHEWGDPANQRVLVCVHGLTRTGRDFDALARSLSDEYRVVCPDVAGRGRSDWLADPRG YVLPQYVSDMVTLIARLNVEQVDWFGTSMGGLIGIGLAGLAKSPVRKLLLNDVGPRITAQSMERIGAYLGLPVRFKTFEE GLAYLQTISASFGRHTPEQWRELNGAILKPVQGAEGLEWGLHYDPALAVPFKDATPEAMQAGEAALWAMFEAIQGPTLVV RGAQSDLLMREILAEMVARGKQVSSVEIPDVGHAPTFVDAAQIAIARQFFLGS
Sequences:
>Translated_293_residues MSSSPRLGFVQCISAAGLHRMAYHEWGDPANQRVLVCVHGLTRTGRDFDALARSLSDEYRVVCPDVAGRGRSDWLADPRG YVLPQYVSDMVTLIARLNVEQVDWFGTSMGGLIGIGLAGLAKSPVRKLLLNDVGPRITAQSMERIGAYLGLPVRFKTFEE GLAYLQTISASFGRHTPEQWRELNGAILKPVQGAEGLEWGLHYDPALAVPFKDATPEAMQAGEAALWAMFEAIQGPTLVV RGAQSDLLMREILAEMVARGKQVSSVEIPDVGHAPTFVDAAQIAIARQFFLGS >Mature_292_residues SSSPRLGFVQCISAAGLHRMAYHEWGDPANQRVLVCVHGLTRTGRDFDALARSLSDEYRVVCPDVAGRGRSDWLADPRGY VLPQYVSDMVTLIARLNVEQVDWFGTSMGGLIGIGLAGLAKSPVRKLLLNDVGPRITAQSMERIGAYLGLPVRFKTFEEG LAYLQTISASFGRHTPEQWRELNGAILKPVQGAEGLEWGLHYDPALAVPFKDATPEAMQAGEAALWAMFEAIQGPTLVVR GAQSDLLMREILAEMVARGKQVSSVEIPDVGHAPTFVDAAQIAIARQFFLGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.-.- [C]
Molecular weight: Translated: 31877; Mature: 31746
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSPRLGFVQCISAAGLHRMAYHEWGDPANQRVLVCVHGLTRTGRDFDALARSLSDEYR CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCE VVCPDVAGRGRSDWLADPRGYVLPQYVSDMVTLIARLNVEQVDWFGTSMGGLIGIGLAGL EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH AKSPVRKLLLNDVGPRITAQSMERIGAYLGLPVRFKTFEEGLAYLQTISASFGRHTPEQW HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH RELNGAILKPVQGAEGLEWGLHYDPALAVPFKDATPEAMQAGEAALWAMFEAIQGPTLVV HHHCCHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE RGAQSDLLMREILAEMVARGKQVSSVEIPDVGHAPTFVDAAQIAIARQFFLGS ECCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSSPRLGFVQCISAAGLHRMAYHEWGDPANQRVLVCVHGLTRTGRDFDALARSLSDEYR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCE VVCPDVAGRGRSDWLADPRGYVLPQYVSDMVTLIARLNVEQVDWFGTSMGGLIGIGLAGL EECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHH AKSPVRKLLLNDVGPRITAQSMERIGAYLGLPVRFKTFEEGLAYLQTISASFGRHTPEQW HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHH RELNGAILKPVQGAEGLEWGLHYDPALAVPFKDATPEAMQAGEAALWAMFEAIQGPTLVV HHHCCHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE RGAQSDLLMREILAEMVARGKQVSSVEIPDVGHAPTFVDAAQIAIARQFFLGS ECCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA