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The map label for this gene is yoaB [C]

Identifier: 94310103

GI number: 94310103

Start: 1266975

End: 1267337

Strand: Direct

Name: yoaB [C]

Synonym: Rmet_1158

Alternate gene names: 94310103

Gene position: 1266975-1267337 (Clockwise)

Preceding gene: 94310102

Following gene: 94310104

Centisome position: 32.25

GC content: 65.01

Gene sequence:

>363_bases
ATGAGCACCAACACCCTGAAGCGCGCCCACGTGGGCAAGCGTCTGTCCGAATACGCGGTCTACAACGGCGTGGTCTATCT
GGCCGGCCAGGTGCCCGAGGTCGACCCCAAGGCCGACCTGCGCGGCCAGACGCGTGAGGTGCTGGGCCATATCGACCGCC
TGCTGGCTGAAGCCGGCAGCGACAAGACACGCATCCTGATGTGTCAGATCTTCCTGACGGACATCACGCGCATTGGCGAG
ATGAACGAGGTGTGGGACGAGTGGGTGGCGCAAGGCAATACACCGCCGCGGGCCACCGTCCAGGCGGCGCTGGCCAATCC
CGACTACCTGATCGAAGTGGTGGTGACGGCCGCGCTCAACTGA

Upstream 100 bases:

>100_bases
GATGTGGGTCATGCTCCGACCTTCGTCGATGCGGCGCAGATTGCCATCGCCCGTCAATTTTTCCTGGGGTCTTGAGCCCC
GCTACTGAACGAAAACTGTC

Downstream 100 bases:

>100_bases
TGCGGGGCGGCAAGACATGGTGACATCGACGGAGCTGACGGGGCAGACCGCGGGCGTGCCCGACGCCGGGCTCGTCGAGC
GCGCGCTCGCGTATGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSTNTLKRAHVGKRLSEYAVYNGVVYLAGQVPEVDPKADLRGQTREVLGHIDRLLAEAGSDKTRILMCQIFLTDITRIGE
MNEVWDEWVAQGNTPPRATVQAALANPDYLIEVVVTAALN

Sequences:

>Translated_120_residues
MSTNTLKRAHVGKRLSEYAVYNGVVYLAGQVPEVDPKADLRGQTREVLGHIDRLLAEAGSDKTRILMCQIFLTDITRIGE
MNEVWDEWVAQGNTPPRATVQAALANPDYLIEVVVTAALN
>Mature_119_residues
STNTLKRAHVGKRLSEYAVYNGVVYLAGQVPEVDPKADLRGQTREVLGHIDRLLAEAGSDKTRILMCQIFLTDITRIGEM
NEVWDEWVAQGNTPPRATVQAALANPDYLIEVVVTAALN

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=115, Percent_Identity=40.8695652173913, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13250; Mature: 13119

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNTLKRAHVGKRLSEYAVYNGVVYLAGQVPEVDPKADLRGQTREVLGHIDRLLAEAGS
CCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
DKTRILMCQIFLTDITRIGEMNEVWDEWVAQGNTPPRATVQAALANPDYLIEVVVTAALN
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
STNTLKRAHVGKRLSEYAVYNGVVYLAGQVPEVDPKADLRGQTREVLGHIDRLLAEAGS
CCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
DKTRILMCQIFLTDITRIGEMNEVWDEWVAQGNTPPRATVQAALANPDYLIEVVVTAALN
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA