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The map label for this gene is 94309932

Identifier: 94309932

GI number: 94309932

Start: 1072988

End: 1073332

Strand: Direct

Name: 94309932

Synonym: Rmet_0987

Alternate gene names: NA

Gene position: 1072988-1073332 (Clockwise)

Preceding gene: 94309928

Following gene: 94309933

Centisome position: 27.32

GC content: 60.58

Gene sequence:

>345_bases
ATGAAAAAGCTCCTCACGATGGTGGTGTTGGGCGCGGCCGCAACGGCTGCGCAGGCCCAGGACAAGGGCAACGTGGACGC
CGCCAAGGACAAGGTCGCAATGTGCATTGGCTGCCATGGCATTCCTGGCTACCGTGCATCGTTCCCCGAGGTATATCAGG
TGCCCATGCTTGGCGGCCAGAGTGCCAAGTACATCGAGAACGCGCTCAAGAGCTACCAGAAGGGTGATCGCAAGCATCCG
ACCATGCGCGGGATTGCCGACAGCCTGTCCGACAAGGACATCGCCGCCGTGGCTGCGTACTACTCGCAGCAGAAGCGCGA
CACGCAGAACAATCCGCTCAAGTAA

Upstream 100 bases:

>100_bases
ACATCAGCACTTACCGCGATTTCAGATCCCCGTTCCCAAAGCCGTTTCGCCCTGCAGGGCAGTCACACGCGGTTTAAACA
CTTCCCACTCAGCTAAGACA

Downstream 100 bases:

>100_bases
GAGGCCCCTGACCATGAAGATGCTGAAAGCTGTTTCGTTCACGCTGGGTGCTGTCGCGCTTGGCGCCGCTGCCACGTCCG
CCTCGGCGGCAGATATTGCC

Product: cytochrome c, class IC 1

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKKLLTMVVLGAAATAAQAQDKGNVDAAKDKVAMCIGCHGIPGYRASFPEVYQVPMLGGQSAKYIENALKSYQKGDRKHP
TMRGIADSLSDKDIAAVAAYYSQQKRDTQNNPLK

Sequences:

>Translated_114_residues
MKKLLTMVVLGAAATAAQAQDKGNVDAAKDKVAMCIGCHGIPGYRASFPEVYQVPMLGGQSAKYIENALKSYQKGDRKHP
TMRGIADSLSDKDIAAVAAYYSQQKRDTQNNPLK
>Mature_114_residues
MKKLLTMVVLGAAATAAQAQDKGNVDAAKDKVAMCIGCHGIPGYRASFPEVYQVPMLGGQSAKYIENALKSYQKGDRKHP
TMRGIADSLSDKDIAAVAAYYSQQKRDTQNNPLK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 12290; Mature: 12290

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLTMVVLGAAATAAQAQDKGNVDAAKDKVAMCIGCHGIPGYRASFPEVYQVPMLGGQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC
SAKYIENALKSYQKGDRKHPTMRGIADSLSDKDIAAVAAYYSQQKRDTQNNPLK
CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKLLTMVVLGAAATAAQAQDKGNVDAAKDKVAMCIGCHGIPGYRASFPEVYQVPMLGGQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC
SAKYIENALKSYQKGDRKHPTMRGIADSLSDKDIAAVAAYYSQQKRDTQNNPLK
CHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]