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The map label for this gene is 94309933

Identifier: 94309933

GI number: 94309933

Start: 1073346

End: 1073744

Strand: Direct

Name: 94309933

Synonym: Rmet_0988

Alternate gene names: NA

Gene position: 1073346-1073744 (Clockwise)

Preceding gene: 94309932

Following gene: 94309935

Centisome position: 27.32

GC content: 61.4

Gene sequence:

>399_bases
ATGAAGATGCTGAAAGCTGTTTCGTTCACGCTGGGTGCTGTCGCGCTTGGCGCCGCTGCCACGTCCGCCTCGGCGGCAGA
TATTGCCGCTGGCAAGGCGCTGGTGGAAAAGGGTGGATGCGTGGCGTGCCACGGCAAGGATCTGAACGCGCCGATCTCGC
CGGACTATCCGAAGCTGGCCGGCCAGCACCAGGACTACATCTATCACGCCCTGTTGTCCTACCAGATCAGTGGCAACCCG
CTGGTGGGCCGCAACAATGCGATTATGGCCGGCCAGGTCAAGAGCAACCCGGCCGTCACCGGCAAGGACGGCAAGCCGCG
GGAGTTTACGCGCAAGGAGTTGAAGGATATTGCCGCGTATATCGAATCGCTGCCCGGCGATCTGGTGCTGAAGAAGTAA

Upstream 100 bases:

>100_bases
GACAGCCTGTCCGACAAGGACATCGCCGCCGTGGCTGCGTACTACTCGCAGCAGAAGCGCGACACGCAGAACAATCCGCT
CAAGTAAGAGGCCCCTGACC

Downstream 100 bases:

>100_bases
GTCGGAAGACGTCAGCCGCTTCGATTCCGTCGCAAGGGAATCGAAGCAAAAGAAAAAGCCGCTCATTCGAGCGGCTTTTT
TCGTTCTGCAGTGCGGTTCA

Product: cytochrome c553

Products: NA

Alternate protein names: Cytochrome; Cytochrome C Family Protein; Cytochrome C -Related Protein; Class I Cytochrome C; Cytochrome C Class IC; Cytochrome C; Periplasmic Cytochrome

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MKMLKAVSFTLGAVALGAAATSASAADIAAGKALVEKGGCVACHGKDLNAPISPDYPKLAGQHQDYIYHALLSYQISGNP
LVGRNNAIMAGQVKSNPAVTGKDGKPREFTRKELKDIAAYIESLPGDLVLKK

Sequences:

>Translated_132_residues
MKMLKAVSFTLGAVALGAAATSASAADIAAGKALVEKGGCVACHGKDLNAPISPDYPKLAGQHQDYIYHALLSYQISGNP
LVGRNNAIMAGQVKSNPAVTGKDGKPREFTRKELKDIAAYIESLPGDLVLKK
>Mature_132_residues
MKMLKAVSFTLGAVALGAAATSASAADIAAGKALVEKGGCVACHGKDLNAPISPDYPKLAGQHQDYIYHALLSYQISGNP
LVGRNNAIMAGQVKSNPAVTGKDGKPREFTRKELKDIAAYIESLPGDLVLKK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13751; Mature: 13751

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMLKAVSFTLGAVALGAAATSASAADIAAGKALVEKGGCVACHGKDLNAPISPDYPKLA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
GQHQDYIYHALLSYQISGNPLVGRNNAIMAGQVKSNPAVTGKDGKPREFTRKELKDIAAY
CCCHHHHHHHHHHEEECCCEEECCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHH
IESLPGDLVLKK
HHHCCCCEEECC
>Mature Secondary Structure
MKMLKAVSFTLGAVALGAAATSASAADIAAGKALVEKGGCVACHGKDLNAPISPDYPKLA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
GQHQDYIYHALLSYQISGNPLVGRNNAIMAGQVKSNPAVTGKDGKPREFTRKELKDIAAY
CCCHHHHHHHHHHEEECCCEEECCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHH
IESLPGDLVLKK
HHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA